Several proteins are required for the transport of nuclear proteins from the cytoplasm to the nucleus, including the nuclear location sequence receptor (NLS receptor), p97, the small nuclear GTPase Ran/TC4, and several nucleoporins. The interaction of Ran with p97 is thought to regulate the interaction of these transport components. Ran-GTP alone binds p97, but Ran-GDP binds p97 only in conjunction with RanBP1. Using sitedirected mutagenesis and deletion analysis, we have identified two distinct but overlapping binding domains for Ran-GTP and Ran-GDP/RanBP1 on p97. A short acidic sequence in p97 is part of the Ran-GDP/RanBP1 binding domain, possibly functioning in a similar manner as the C-terminal acidic sequence in Ran. A conserved cysteine residue in p97, Cys-158, is required for binding Ran-GDP/RanBP1, but not for binding of Ran-GTP to p97. In a permeabilized cell protein import assay, a mutant p97 with alanine substituted for Cys-158 is unable to support import in the presence of NLS receptor and Ran. These results support a direct active role for Ran-GDP in the receptor complex and provide evidence that the activity of downstream effectors of small GTPases may be regulated by both GTP-and GDPbound forms of the protein.The transport of karyophilic proteins from the cytoplasm to the nucleus involves multiple steps and several protein factors. Proteins destined for the nucleus associate with the nuclear import machinery via short basic peptide sequences termed nuclear localization sequences or NLSs 1 (1). The NLS is recognized by a specific NLS-binding protein in the cytoplasm, the NLS receptor, also known as importin ␣/karyopherin ␣/PTAC58 (2-5). The NLS receptor and karyophile then bind to the nuclear pore via a second factor p97/importin /karyopherin /PTAC90 (6 -9). p97 mediates interaction with the pore by direct association with a subset of a peptide repeat-containing family of nuclear pore complex proteins (nucleoporins) (10 -12). Subsequent translocation of the receptor complex through the pore requires the action of the small nuclear GTPase Ran/ TC4 and GTP hydrolysis (13,14). Like other small GTPases, Ran requires a GTPase-activating protein Ran-GAP1, which is localized to the cytoplasm and a nuclear guanine nucleotide exchange factor, RCC1 (15-18).Several other Ran-binding proteins have been identified that are important for Ran function in protein import. The Ran-GTP binding proteins RanBP1 and RanBP2 were identified on overlay blots as specifically binding the GTP form of Ran (19,20). RanBP2/Nup358 is a nucleoporin that localizes to filaments extending from the cytoplasmic surface of the pore (21, 22). RanBP2 binds both p97 and Ran-GTP (11, 21-23) and has been proposed to be the initial docking site for the receptor complex on the pore and the site of GTP hydrolysis during transport (23). RanBP1 localizes to the cytoplasm, is essential for protein import in yeast (24), and stimulates protein import in a permeabilized cell assay (25). In solution, RanBP1 co-activates Ran-GTPase through an interac...