PLS modelling of antiarrhythmic activity of phenylpyridines based on the Free-Wilson descriptor matrix is described. The Free-Wilson descriptor matrix consists of fifteen columns for four substituents (Rl, RZ, R3 and R4). The contribution of structural fragments to the antiarrhythmic activity is examined by the MLR-like model Eq. converted from the PLS model. The result corresponds with the previous PLS analysis of phenylpyridines and this correspondence implicitly validates the PLS analysis with the Free-Wilson descriptor matrix used in this study.Abbreviations: PLS-Partial least squares; CoMFA-Comparative molecular field analysis; QSAR-Quantitative structure-activity relationships; MLR-Multiple linear regression Key words: PLS, Free-Wilson, discriminant analysis, antiarrhythmic activity, phenylpyridines chemistry are used as structural descriptors. Free-Wilson descriptors [lo] representing the variation in structural fragments are also used. Norinder has analyzed some structure-activity data using the Free-Wilson descriptor matrix with PLS and excellent PLS models were obtained [ 11, 121. He has shown that the Free-Wilson analysis using PLS is superior to the one using MLR [ 121.* to receive all correspondence 093 1-877 I /95/0-109-0344 %5.00+.7-5/0