2012
DOI: 10.1038/gene.2012.52
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Multiple sclerosis-associated single-nucleotide polymorphisms in CLEC16A correlate with reduced SOCS1 and DEXI expression in the thymus

Abstract: Genome-wide association studies have revealed that the 16p13 chromosomal region, including CLEC16A, DEXI, CIITA and SOCS1, is associated with susceptibility to autoimmune diseases. As non-coding single-nucleotide polymorphisms (SNPs) may confer susceptibility to disease by affecting expression of nearby genes, we examined whether autoimmune-associated intronic CLEC16A SNPs (rs12708716, rs6498169 and rs7206912) correlate with the expression of CLEC16A itself as well as neighboring genes in whole-blood and thymi… Show more

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Cited by 34 publications
(48 citation statements)
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“…Aside from the tight LD observed in the associated locus, the pursuit of revealing the diseasecausing variant has been hindered by the lack of association of nsSNPs [1,8,12] and inconclusive evidence that the associated intronic SNPs exert transcriptional effects on CLEC16A and its surrounding genes [1,[13][14][15] and Marchand et al 2009 and Zouk et al 2102 (unpublished results). Therefore, before uncovering such potential causal variants, it is imperative that we gain more insight into the largely unknown function of the CLEC16A protein to decipher how these variants, when discovered, would affect protein function and consequent disease pathology.…”
Section: Discussionmentioning
confidence: 99%
“…Aside from the tight LD observed in the associated locus, the pursuit of revealing the diseasecausing variant has been hindered by the lack of association of nsSNPs [1,8,12] and inconclusive evidence that the associated intronic SNPs exert transcriptional effects on CLEC16A and its surrounding genes [1,[13][14][15] and Marchand et al 2009 and Zouk et al 2102 (unpublished results). Therefore, before uncovering such potential causal variants, it is imperative that we gain more insight into the largely unknown function of the CLEC16A protein to decipher how these variants, when discovered, would affect protein function and consequent disease pathology.…”
Section: Discussionmentioning
confidence: 99%
“…Dysregulation of SOCS expression has been implicated in several inflammatory diseases, including models of multiple sclerosis (65)(66)(67)(68)(69), rheumatoid arthritis (70,71), systemic lupus erythematosus (72,73), psoriasis (74,75), type 1 diabetes (51, 76 -79), sepsis (80,81), and also in human allergic disease (82)(83)(84). Furthermore, deficiencies in SOCS1 expression have been observed in the smooth muscle in airways (85), and epithelial cells (86) of asthmatic patients and functional SOCS1 polymorphism have been correlated with the development of adult onset asthma and increased IgE levels (87,88).…”
Section: Socs1 Regulates Il-4-induced Irs-2 Signaling In Human Monocytesmentioning
confidence: 99%
“…Although the role of heredity is yet to be fully understood, variations in specific genes, especially those relating to inflammation, have been associated with an increased risk of MS and corresponds well with the increased inflammatory response observed in the advancement of MS. [6][7][8][9] This is further supported by the increased incidence of MS in those with dysregulation of T-cell differentiation, particularly effector T cells. 7,9 Naïve CD4 + T cells can mature into different effector T-cell types including helper T (T H ) (T H 1, T H 2, and T H 17) and regulatory T (Treg) cells. 10 IFN-γ-secreting T H 1 cells and interleukin (IL) 17-secreting T H 17 cells are present in MS lesions in the CNS and are known to be integral in the pathogenesis of MS in human and mouse models.…”
Section: Multiple Sclerosis (Ms) Is a Neurodegenerative Disease Charamentioning
confidence: 55%
“…28,152 When cytokine function is abnormal, this leads to an autoimmune reaction within the body. Thus, cytokine regulation is a good potential therapeutic target for patients with MS. 9 The upregulation of IL-23 is widely accepted as a key checkpoint in the pathogenesis of MS because of its protective and differentiative role in T H 17 cells. 7 Finding ways to decrease the elevated serum and CNS levels of IL-23 in MS and EAE models is a major point of interest.…”
Section: Discussionmentioning
confidence: 99%
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