The murine Ia antigens, heterodimeric glycoproteins on the surface of immunocompetent cells, restrict immune recognition by their influence on cell-cell interactions. Many serological specificities have been mapped to these molecules, and monoclonal antibodies directed against some of these determinants block antigen presentation to T lymphocytes. As a step toward a better understanding of Ia function, we sought to define the molecular basis of Ia.2 and Ia.19, specificities found on the Aa chain of only the k or of both k and r haplotypes, respectively. We report nucleotide sequences for the Aa chain cDNAs of the k, r, and s haplotypes, which, when compared to previously published Aa sequences, demonstrate the existence of one k-specific amino acid residue and of another present only in the k and r haplotypes. These residues must thus play an important role in the generation of Ia.2 and Ia.19 specificities.Painstaking serological studies have played an important role in revealing the fascinating diversity of the major histocompatibility complex (MHC) (for reviews, see refs.