Chromatin remodeling is fundamental for B-cell differentiation. In the present study, we explored the role of KAP1, the cofactor of KRAB-ZFP transcriptional repressors, in this process. B-lymphoidspecific Kap1-KO mice displayed reduced numbers of mature B cells, lower steadystate levels of Abs, and accelerated rates of decay of neutralizing Abs after viral immunization. Transcriptome analyses of Kap1-deleted B splenocytes revealed an up-regulation of PTEN, the enzymatic counteractor of PIK3 signaling, and of genes encoding DNA-damage response factors, cell-cycle regulators, and chemokine receptors. ChIP/seq studies established that KAP1 bound at or close to several of these genes and controlled chromatin status at their promoters. Genome wide, KAP1 binding sites lacked active B cell-specific enhancers and were enriched in repressive histone marks, further supporting a role for this molecule in gene silencing in vivo. Likely responsible for tethering KAP1 to at least some of these targets, a discrete subset of KRABZFPs is enriched in B lymphocytes. Our results therefore reveal the role of KRAB/ KAP1-mediated epigenetic regulation in B-cell development and homeostasis.
IntroductionEpigenetics play a major role in ontogeny and cell specification, as illustrated by human developmental diseases caused by mutations in components of the epigenetic machinery and by the phenotypic consequences of the knockout (KO) of epigenetic regulators on mouse embryogenesis and stem cell biology. 1 This level of regulation is also key to the lineage differentiation of adult tissues, in particular for the development of immune cells. As a corollary, altered epigenetic regulation has been linked to autoimmune and allergic diseases and to hematopoietic malignancies. 2 B-cell progenitors (Pro-B cells) derive from multipotent lymphoid progenitors in the bone marrow (BM). Pro-B cells initiate the IgH locus rearrangement, completed during maturation to B-precursor (Pre-B) cells. After rearrangement of an Ig light chain locus and surface expression of a complete IgM molecule, immature B cells egress from the BM and migrate to the spleen, where they undergo further maturation steps called transitional stages 1 and 2 (T1 and T2) and eventually differentiate into mature follicular (FO) and marginal zone (MZ) B cells. 3,4 FO cells are mostly composed of conventional B2 cells, which can recirculate and are responsible for T cell-dependent Ab production. In contrast, MZ B lymphocytes are sessile, nonconventional cells that, together with B1 cells, contribute to the T cell-independent Ab response. B1 cells predominantly reside in the peritoneal and pleural cavities and are thought to arise from a self-renewing fetal precursor located in the peritoneum or from B1 progenitors in adult BM. 4 B-cell development and homeostasis require the integration of external and internal clues. External stimuli are sensed mainly by the BCR and other membrane receptors (ie, IL-7R, Notch2, BAFFR, and various chemokine receptors). Signals from these receptors are the...