“…Nils Walter predicted as follows: “In a decade
or two from
now, each static structure from X-ray crystallography in our biochemistry
textbooks may be accompanied by a dynamic video of the same biopolymer
in actual biological action.” 352 Thus far, we have videos of only four proteins that can be placed
in such textbooks: bR, 43,48 myosin V, 47 F 1 -ATPase, 51 and
P2X 4 R. 36 In other HS-AFM imaging
studies conducted so far, protein structures are not well resolved
(for example, cellulase, 56 Ca 2+ pump, 49 NMDA receptor, 60 restriction enzymes 30,39,53 ), or diffusion and interaction processes of proteins are imaged
instead of biological actions while their structures are resolved
(for example, c-rings, 38 OmpF, 58 and aquaporin-0 59,70 ). There are
countless proteins that are interesting to be investigated using HS-AFM:
condensin assembling chromatins into a chromosome, helicase unwinding
a double-stranded DNA, RecBCD unwinding a double-stranded DNA and
digesting the resulting single strands, proteasomes digesting polyubiquitinated
proteins, E3 ubiquitin ligase self-ubiquitinating or ubiquitinating
substrate proteins, dynein moving on microtubules, AAA proteins disaggregating
aggregated proteins, ABC transporters transporting substrates, dynamin
squeezing membrane tubes, protein transport apparatuses transporting
proteins, MreB and ParM in polymerization, many channel proteins opening
and closing their channels during gating, DNA polymerase synthesizing
a complementary DNA strand, and ribosome synthesizing a polypeptide.…”