Morpho-physiological diversity in the collection of sour cherry (Prunus cerasus) cultivars of the Fruit Genebank in Naoussa, Greece using multivariate analysis

Ganopoulos, Ioannis; Moysiadis, Theodoros; Xanthopoulou, Aliki; Osathanunkul, Maslin; Madesis, Panagiotis; Zambounis, Antonios; Avramidou, Evangelia V.; Aravanopoulos, Filippos A.; Tsaftaris, Athanasios; Sotiropoulos, Thomas; Chatzicharisis, Ioannis; Kazantzis, Konstantinos

doi:10.1016/j.scienta.2016.05.018

Cited by 17 publications

(10 citation statements)

References 31 publications

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“…The multivariate analysis method has been used to study various germplasm collections of Prunus spp. (Ganopoulos et al, 2015;Ganopoulos et al, 2016;Font i Forcada et al, 2014;Khadivi-Khub et al, 2016;Khadivi-Khub et al, 2012;Nikolić et al, 2010;Rakonjac et al, 2010;Ruiz and Egea, 2008) and Malus × domestica (Gaši et al, 2011;Pereira-Lorenzo et al, 2003;Reig et al, 2015). Here, the PCA testing revealed that all variables examined showed high scores regarding the first eight principal components.…”

Section: Multivariate Analysis Of Qualitative Variables: Pca and Ahc mentioning

confidence: 64%

Phenotypic and molecular characterization of apple (Malus × domestica Borkh) genetic resources in Greece

Ganopoulos¹,

Tourvas

Xanthopoulou

et al. 2018

Sci. agric. (Piracicaba, Braz.)

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ABSTRACT:The phenotypic and genetic analysis of apple (Malus × domestica Borkh) genotypes is essential for breeding species. Information on the morphology and genetic structure of apple offers significant help for germplasm maintenance and selection of suitable material to breed superior cultivars. This study shows the results of an investigation on the morphology and the genetic diversity for 19 apple cultivars, which are preserved in an ex situ collection in Naoussa, Central Macedonia, Greece. Information was recorded over a 5-year period for 47 traits describing plant morphology and phenotype, as well as leaf and fruit quality. Data were analyzed using the principal component analysis (PCA) method. The Euclidean distance metric and the Ward's agglomeration method were used in an unsupervised hierarchical cluster analysis of all cultivars. The cultivars were grouped into four main clusters, suggesting that the characterized apple collection has a high potential for specific breeding goals. Furthermore, the cultivars were genotyped using seven microsatellite primers. Moderate levels of polymorphism were detected, and 38 distinctive alleles (5.4 alleles per primer pair) were identified. Both multivariate clustering approach (phenotypic data) and the genetic distance clustering approach (genetic data) grouped the apple cultivars according to their type. Hence, these data could be used for protection or patenting processes of existing or new apple cultivars carried out by the EU-Community Plant Variety Office.

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Section: Multivariate Analysis Of Qualitative Variables: Pca and Ahc mentioning

confidence: 64%

Phenotypic and molecular characterization of apple (Malus × domestica Borkh) genetic resources in Greece

Ganopoulos¹,

Tourvas

Xanthopoulou

et al. 2018

Sci. agric. (Piracicaba, Braz.)

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“…. in enzyme treated and pasteurized sour cherry juice from Turkish sour cherry cultivars were reported by Damar and Eksi (2012), while other authors (Ganopoulos et al, 2016;Grafe & Schuster, 2014;Papp et al, 2010;Siddiq et al, 2011;Wojdyło et al, 2014) determined slightly lower values, which may be caused by the cultivar differences as well as by the climate conditions and sample preparation. It can be observed that BR, MA, 18, and OS juices had SS above 20%, while REX, HEI, and KEL juices had SS below the specified value.…”

Section: Sciencesmentioning

confidence: 87%

“…On the other hand, there are cultivars that achieve its best quality in Mediterranean climate conditions, like autochthonous cultivar Maraska grown in Dalmatia region Pedisić, Dragović-Uzelac, Levaj, &Škevin, 2010;Repajić et al, 2015;Viljevac et al, 2012;Viljevac Vuletić et al, 2017). Multiple authors confirmed differences among sour cherry cultivars in quality characteristics such as soluble solids (SS) content (Ganopoulos et al, 2016;Grafe & Schuster, 2014;Papp et al, 2010;Siddiq et al, 2011;Wojdyło et al, 2014), content of sugars and acids Ganopoulos et al, 2016;Grafe & Schuster, 2014;Papp et al, 2010;Siddiq et al, 2011;Wojdyło et al, 2014), color (Pedisić, Levaj, Dragović-Uzelac,Škevin, & Skendrović Babojelić, 2009;Siddiq et al, 2011;Viljevac et al, 2012) as well as the content of bioactive compounds (Homoki et al, 2016;Khoo et al, 2011;Papp et al, 2010;Pedisić et al, 2009;Siddiq et al, 2011;Viljevac Vuletić et al, 2017;Wojdyło et al, 2014), and sensory characteristics .…”

Section: Introductionmentioning

confidence: 91%

“…Many sour cherry cultivars are known as continental cultivars (Ganopoulos et al., ; Grafe & Schuster, ; Homoki et al., ; Khoo et al., ; Papp et al., ; Pissard et al., ; Siddiq et al., ; Viljevac et al., ; Wojdyło et al., ), mainly grown in north and middle European countries (Clausen et al., ; Khoo et al., ; Wojdyło et al., ) as well as in Balkan region (Mihaljević et al., ). On the other hand, there are cultivars that achieve its best quality in Mediterranean climate conditions, like autochthonous cultivar Maraska grown in Dalmatia region (Levaj et al., ; Pedisić, Dragović‐Uzelac, Levaj, & Škevin, ; Repajić et al., ; Viljevac et al., ; Viljevac Vuletić et al., ).…”

Section: Introductionmentioning

confidence: 99%

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Quality and Sensory Study of Fresh Sour Cherry Juices Upon Cultivar, Growing Area and Weather Conditions

Repajić

Puškar²,

Dugalić³

et al. 2019

Journal of Food Science

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Freshly squeezed sour cherry (Prunus cerasus L.) juices of Maraska Brač (BR), Maraska MA (MA), Oblačinska 18 (18), Oblačinska Osječka (OS), Rexelle (REX), Heimann conserved (HEI), and Kelleris 16 (KEL) grown in different climate regions (Mediterranean and continental) in two consecutive harvest years were analyzed for quality and sensory properties. Obtained results showed that investigated sources of variation (cultivar, growing area, harvest year) significantly influenced physical, chemical, and sensory properties of tested juices. All juices had high soluble solids (SS) (17.26% to 25.89%), especially BR (24.19%), MA (25.89%), 18 (24.66%), and OS (23.61%). Juices also had considerable total phenols (TP) content (2.19 to 5.87 mg GAE ml−1) and antioxidant capacity (AC) (0.020 to 0.045 mmol TE mL−1) with BR, MA, REX, and HEI containing the highest amounts of bioactive compounds (BR = 5.87 mg GAE mL−1, MA = 5.68 mg GAE mL−1, REX = 4.42 mg GAE mL−1, HEI = 4.27 mg GAE mL−1). Sensory evaluation showed that all juices had satisfying sensory profiles with BR, MA, 18, OS, and KEL juices scoring particularly high (5.3 to 8.9 of 10) in desirable sensory properties (color intensity [CI], sour cherry taste [SCT], harmonious taste [HT], taste fullness [TF], sour cherry odor [SCO], and viscosity [V]) of fresh sour cherry cloudy juice. Juices from Mediterranean area achieved higher values for SS, pH, SS/TA ratio, TP, AC, SCT, HT, TF, SCO, and V compared to continental zone juices. Harvest year with higher temperatures and less rainfall also resulted in higher SS, pH, TP, and AC as well as stronger expression of desirable sensory properties. Practical Application The results of this study provide an insight into sour cherry potential for use in functional food products, including today's popular smoothies, since it is fruit rich with health contributing compounds and possesses desirable sensory characteristics (color intensity, sour cherry taste, harmonious taste, taste fullness, sour cherry odor, and viscosity) at the same time, which can differ due to cultivar, climate diversity as well as weather conditions.

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“…2015 ), peach ( Prunus persica L.) ( Chalak et al . 2013 ), cherry ( Prunus cerasus ) ( Ganopoulos et al . 2016 ), durian ( Durio zibethinus ) ( Handayani & Ismadi 2018 ), and Amrapali mango ( Meena & Asrey 2018 ).…”

Section: Introductionmentioning

confidence: 99%

Morphological Variability Identification of Harumanis Mango (Mangifera indica L.) Harvested from Different Location and Tree Age

Yusuf

Rahman

Zakaria

et al. 2020

TLSR

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Harumanis is one of the main signatures of Perlis with regards to its delightful taste, pleasant aroma and expensive price. Harumanis authenticity and productivity had become the remarks among the farmers, entrepreneurs, consumers and plant breeders due to the existence of morphological characteristics variation among the fruits and high production cost. Assessment of Harumanis morphological characteristics of natural population and different tree ages may represent a possible source of important characteristics for development and breeding purposes of Harumanis . The aim of this study is to evaluate the morphological variation of Harumanis collected from different location in Perlis and tree age. A total of 150 Harumanis fruits from 50 trees with three different stages of development (young, middle-aged and old) were characterised using 11 traits; 10 quantitative and one qualitative morphological trait. The ANOVA analyses in combination with Dunn’s pairwise and Kruskal-Wallis multiple comparison test able to point out the existence of environmental factor and age influence towards the significant different of identified morphological traits except for Total Soluble Solid (TSS) and pulp percentage. Five clusters of 50 Harumanis accessions reflect a grouping pattern which not according to neither geographical region nor age. The result of Principal Component Analysis (PCA) using the first two principal components (PCs) provided a good approximation of the data explaining 84.09% of the total variance which majorly contributed by parameters of weight, fruit dimensional characteristics, peel percentage and hue angle, h . Preliminary screening of important morphological characteristics which contribute to the phenotypic diversity of Harumanis is successfully achieved. The findings can be employed by the plant breeders and farmers for the establishment of standard grading of Harumanis and advancement of breeding crop of Harumanis in future.

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Morpho-physiological diversity in the collection of sour cherry (Prunus cerasus) cultivars of the Fruit Genebank in Naoussa, Greece using multivariate analysis

Cited by 17 publications

References 31 publications

Phenotypic and molecular characterization of apple (Malus × domestica Borkh) genetic resources in Greece

Phenotypic and molecular characterization of apple (Malus × domestica Borkh) genetic resources in Greece

Quality and Sensory Study of Fresh Sour Cherry Juices Upon Cultivar, Growing Area and Weather Conditions

Morphological Variability Identification of Harumanis Mango (Mangifera indica L.) Harvested from Different Location and Tree Age

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