Summary:The main aim of this paper was to compare results of Genescan and real-time PCR methods in order to detect contamination in harvests from patients with follicular lymphoma. The secondary goal was to evaluate the efficacy of Rituximab as an in vivo purging agent. A total of 23 patients had been treated with CHOP followed by either high-dose therapy (12 patients) or high-dose plus Rituximab (11 patients), both followed by autologous transplantation. Results show that 86% of harvests from patients treated whith Rituximab were PCR-negative compared to 14.3% from controls. Real-time PCR was more sensitive than Genescan PCR; quantitative analysis revealed a correlation between the amount of contamination in the harvests and relapse after transplantation. Whereas all patients reinfused with negative aphereses achieved complete remission and showed a significantly better 5-year PFS (100%) compared to those reinfused with contaminated samples (41%), a very low amount of contamination does not appear to negatively affect outcome, suggesting that determination of a cutoff in the contamination level of harvests could be useful. Results suggest that real-time PCR is superior to Genescan PCR to select transplantable harvests and confirm the ability of Rituximab as an in vivo purging tool for follicular lymphoma. Bone Marrow Transplantation (2003) 32, 57-63. doi:10.1038/sj.bmt.1704102 Keywords: minimal residual disease; follicular lymphoma; autologous transplantation; rituximab; purging Although indolent non-Hodgkin's lymphoma (NHL) patients have a fairly long survival, they frequently experience relapses and truly curative treatments are not available to date. The most efficacious recent protocols involve high-dose therapy and anti-CD20 monoclonal antibody (Rituximab). 1 This provides some advantages, at least in terms of halting disease progression. 2 Owing to the long median survival of patients with indolent diseases, definitive clinical results of new trials may not become evident for a long period of time. Consequently, surrogate end points of survival, such as clearance of neoplastic cells from bone marrow or peripheral blood, could be provisionally considered. In the great majority of follicular lymphoma patients, the neoplastic clone is characterized by a reciprocal balanced chromosomal translocation, the t(14;18) (q32;q21), involving the bcl2 gene on chromosome 18 and the immunoglobulin heavy chain gene on chromosome 14. 3 Highly sensitive molecular methods for detecting the t(14;18) have been developed in an attempt to clarify the possible clinical role of minimal residual disease. After a program of high-dose therapy and autotransplantation, up to 68% of patients provided uncontaminated harvests. Indeed, those patients receiving PCR-negative stem cells maintained both negative molecular status and continuous clinical remission. 4 Nevertheless, these data derive from a labor-intensive and time-consuming molecular method consisting of conventional PCR assays followed by hybridization with patient-specific rad...