1999
DOI: 10.1016/s1097-2765(00)80467-0
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Molecular Recognition of Fatty Acids by Peroxisome Proliferator–Activated Receptors

Abstract: The peroxisome proliferator-activated receptors (PPARs) are nuclear receptors for fatty acids (FAs) that regulate glucose and lipid homeostasis. We report the crystal structure of the PPAR delta ligand-binding domain (LBD) bound to either the FA eicosapentaenoic acid (EPA) or the synthetic fibrate GW2433. The carboxylic acids of EPA and GW2433 interact directly with the activation function 2 (AF-2) helix. The hydrophobic tail of EPA adopts two distinct conformations within the large hydrophobic cavity. GW2433 … Show more

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Cited by 1,033 publications
(798 citation statements)
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References 28 publications
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“…However, the interaction between the PPAR-delta À87T4C and the P:S ratio on features on the MS did not reach statistical significance (not shown). Furthermore, we cannot exclude the possibility of an interaction with other PPAR isoforms as fatty acids are ligands for all three PPARs, 13,31 all PPARs exert their effect via shared metabolic pathways including lipid transport and metabolism. PPAR-delta is also expressed in tissues where PPARa and PPARg are expressed.…”
Section: Discussionmentioning
confidence: 99%
“…However, the interaction between the PPAR-delta À87T4C and the P:S ratio on features on the MS did not reach statistical significance (not shown). Furthermore, we cannot exclude the possibility of an interaction with other PPAR isoforms as fatty acids are ligands for all three PPARs, 13,31 all PPARs exert their effect via shared metabolic pathways including lipid transport and metabolism. PPAR-delta is also expressed in tissues where PPARa and PPARg are expressed.…”
Section: Discussionmentioning
confidence: 99%
“…Importantly, the PPARs act as obligate heterodimers with RXR to bind PPAR response elements consisting of direct repeats of AGGTCA separated by one nucleotide (DR1). PPARs have a large, promiscuous ligand binding pocket and in addition, are subject to RXR ligand activation by 9-cis-retinoic acid and synthetic agonists (Nolte et al 1998;Xu et al 1999). …”
Section: Pparsmentioning
confidence: 99%
“…As PPAR-g can be activated by fatty acids (Xu et al, 1999), we hypothesized that the effects of marine fatty acids on glucose metabolism could be partly mediated via PPAR-g, and therefore the common Pro12Ala polymorphism in the gene encoding for the PPAR-g2 (PPARG) might modify the associations of fatty acids with FFA and glucose levels and with insulin resistance. Earlier, the transcriptionally less active Ala-allele has been associated with enhanced insulin sensitivity (Ek et al, 2001) and antilipolytic effect of insulin (Stumvoll et al, 2001), resulting in lower FFA concentrations (Stumvoll and Häring, 2002), and with a reduced risk of TIID (Altshuler et al, 2000).…”
Section: Introductionmentioning
confidence: 99%