2020
DOI: 10.1038/s41467-020-15606-0
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Molecular profiling of driver events in metastatic uveal melanoma

Abstract: Metastatic uveal melanoma is less well understood than its primary counterpart, has a distinct biology compared to skin melanoma, and lacks effective treatments. Here we genomically profile metastatic tumors and infiltrating lymphocytes. BAP1 alterations are overrepresented and found in 29/32 of cases. Reintroducing a functional BAP1 allele into a deficient patient-derived cell line, reveals a broad shift towards a transcriptomic subtype previously associated with better prognosis of the primary disease. One o… Show more

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Cited by 116 publications
(162 citation statements)
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“…Recent findings demonstrated that the deletion of CDKN2a could play an important role in the development and metastatic progression in UM, especially with 8q amplification. However, more studies are needed to clarify better the role of this gene in UM development and biological behavior ( 24 , 25 ).…”
Section: Discussionmentioning
confidence: 99%
See 1 more Smart Citation
“…Recent findings demonstrated that the deletion of CDKN2a could play an important role in the development and metastatic progression in UM, especially with 8q amplification. However, more studies are needed to clarify better the role of this gene in UM development and biological behavior ( 24 , 25 ).…”
Section: Discussionmentioning
confidence: 99%
“…It was hypothesized that the monoallelic deletion of CDKN2A and the gain of at least three copies of 8q are early events in UM development. Conversely, acquisition of biallelic loss of CDKN2A and higher amplification of 8q could be relevant in metastatic progression ( 24 , 25 ).…”
Section: Introductionmentioning
confidence: 99%
“…In contrast to posterior UM, mutations in BRAF (0–47%) and NRAS have been described in iris melanoma, although the frequency of their presence is unclear, and they might not represent driver mutations ( Table 1 ) [ 44 , 45 , 46 , 47 ]. As the iris is not protected from UV damage, UV-induced mutational signatures have recently been detected in iris melanoma [ 48 , 49 ].…”
Section: Genetic Biomarkers At Initial Diagnosis Of the Primary Tumentioning
confidence: 99%
“…Therefore, experience with the treatment of metastatic iris melanoma is scarce, and little is documented. It could be hypothesized that immune checkpoint inhibitors have possible efficacy, as iris melanoma shows the same UV-induced mutational signatures as cutaneous melanoma [ 48 , 49 ]. As for targeted therapy, it is unknown whether BRAF -mutated iris melanoma responds to BRAF(/MEK) inhibition, as it is not described in the literature.…”
Section: Genetic Biomarkers When Metastatic Disease Is Presentmentioning
confidence: 99%
“…The presence of this monosomy is associated with a five-year survival rate of 39%, whereas a 90% five-year survival rate is observed for UM without monosomy 3 [ 58 ]. Interestingly, BRCA1-associated protein-1 (BAP1) is a tumor-suppressor gene placed on chromosome 3, and it is mutated in 47% of primary UM and up to 91% of metastatic UM [ 59 , 60 , 61 , 62 , 63 , 64 ]. The splicing factor 3B subunit 1 (SF3B1) is consistent with disomy 3 and shows more favorable prognosis, although an association with delayed metastases has been reported [ 65 , 66 , 67 ].…”
Section: Prognosis Of Ummentioning
confidence: 99%