Molecular phylogenetics illuminates evolutionary history and hidden diversity of Australian cave crickets (Orthoptera: Rhaphidophoridae)

Abstract

Cave crickets (Orthoptera: Rhaphidophoridae) are a globally distributed group of insects found in dark, humid microhabitats including natural caves, alpine scree, and forest litter. Ten extant subfamilies are currently described and Macropathinae, which comprises the entirety of the fauna in South America, South Africa, Australia, and New Zealand, is thought to be the most ancient of these. The New Zealand rhaphidophorid fauna supports high phylogenetic diversity throughout its mesic zone, with most species occurring above-ground. In contrast, the Australian fauna is poorly known, with an apparently greater relative proportion of species utilising caves as refugia. A robust phylogenetic framework is needed to underpin future taxonomic work on the group and potentially contrasting patterns of taxonomic diversity within Macropathinae. Here, we performed fossil-calibrated phylogenetic analysis using whole mitochondrial genomes and nuclear markers to reconstruct the evolutionary history of Macropathinae, with a focus on the Australian fauna. By dramatically increasing taxon sampling relative to past studies, we recover the Australian fauna as rampantly polyphyletic, with the remaining Macropathinae nested amongst six distinct Australian lineages. Deep divergences between major clades imply additional Australian lineages remain undetected, either due to extinction or sampling bias, and have likely confounded past biogeographic signal. We infer the radiation of Macropathinae began during the Lower Jurassic prior to the fragmentation of Gondwana with a potential Pangaean origin for Rhaphidophoridae. Finally, we find evidence for several undescribed taxa of Australian Rhaphidophoridae, all of which qualify as short-range endemics, and discuss the conservation implications of these restricted distributions.