Molecular phylogenetic of silver barb barbonymus gonionotus (bleeker, 1849) (cypriniformes: cyprinidae) in Java, Indonesia

Valen, Fitri Sil; Widodo, Maheno Sri; Islamy, R Adharyan; Wicaksono, Karuniawan Puji; Soemarno,; Insani, L; Hasan, Veryl

doi:10.1088/1755-1315/1036/1/012011

Cited by 5 publications

(6 citation statements)

References 18 publications

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“…Indonesia memiliki keanekaragaman ikan yang sangat besar, setidaknya terdapat lebih dari 8.500 spesies ikan diklasifikasikan berdasarkan fitur habitat (misalnya, perairan asin, perairan payau, dan perairan tawar) (Hasan et al, 2023a;Ndobe et al 2022;Nurjirana et al al 2022;Gani et al 2021;Hasan et al 2021a). Untuk keragaman ikan air tawar sendiri juga cukup besar dimana pada tahun 2022 tercatat sebanyak 1.266 spesies yang terdiri dari endemik, ikan asli, dan ikan pendatang atau lebih dikenal dengan istilah ikan introduksi (Hasan et al 2023b;Insani et al, 2023;Valen et al, 2022a;Valen et al 2021;Hasan et al 2020a;Widodo et al, 2020) Akan tetapi, keanekaragaman spesies air tawar saat ini mulai terancam serius akibat aktivitas manusia seperti modifikasi habitat, penangkapan ikan berlebihan, dan masuknya spesies asing (Kusumah et al 2023;Jerikho et al2023;Robin et al, 2023a). Salah satu spesies asing yang turut mengancam keragaman ikan air tawar di Indonesia adalah kehadiran ikan Nila Tilapia (Oreochromis niloticus) di habitat alami perairan tawar (Serdiati et al, 2021;Insani et al, 2020).…”

Section: Pendahuluanunclassified

“…Penemuan O. Niloticus Penemuan O. Niloticus di Sungai Lenggang, Desa Lenggang, Kecamatan Gantung, Kabupaten Belitung Timur, Pulau Belitung, Indonesia rekor baru yang mewakili jangkauan invasi spesies sekitar 226 km ke arah timur dari Pulau Bangka (Gambar 3). Sebenarnya catatan baru dan jangkauan pesebaran ikan berkontribusi untuk memahami keanekaragaman spesies dan biogeografi, dan meningkatkan pengetahuan tentang distribusi spesies (Robin et al, 2023b;Valen et al, 2022c;Hasan et al, 2022a;Hasan et al, 2022b;Hasan et al, 2021c;Hasan et al, 2021d). Jangkauan ekspansi dari Nila Tilapia di Indonesia diawali dari Sumatera, Kalimantan, dan Jawa dan sekarang turut menginvasi Pulau Belitung.…”

Section: Hasil Dan Pembahasan Hasil Karakteristik Meristik Dan Morfologiunclassified

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Kehadiran ikan invasif Nila Tilapia Oreochromis niloticus (Perciformes: cichlidae) di kepulauan Belitung, Indonesia

Hafidz,

Vallen

2024

Akuakultur

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The research was carried out aiming to report for the first time the presence of Oreochromis niloticus on Belitung Island (Indonesia), updating the invasion range of this species. The presence of non-native fish can have a negative impact on aquatic species communities through competition for resources, predation, hybridization, habitat modification, disease transmission (infection or parasitism), and genetic effects. We carried out an expedition to obtain O. niloticus specimens on January 20 and 25 2023, around six O. niloticus specimens were caught in the Lenggang River, Lenggang Village, Gantung District, East Belitung Regency, Belitung Island, Indonesia. Results from observations of meristic and morphological characteristics led to several specimens collected on Belitung Island being identified as Oreochromis niloticus. Discovery of O. Niloticus in the Lenggang River, as a new record representing the species' invasion range approximately 226 km to the east of Bangka Island. The discovery of this species contributes to understanding the extent of expansion and invasion of O. niloticus in Indonesia. This information is very important for classifying and determining river conservation strategies, as well as for planning efforts to protect ecosystems, especially from non-native species that have the potential to become invasive species.

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Section: Pendahuluanunclassified

Section: Hasil Dan Pembahasan Hasil Karakteristik Meristik Dan Morfologiunclassified

Kehadiran ikan invasif Nila Tilapia Oreochromis niloticus (Perciformes: cichlidae) di kepulauan Belitung, Indonesia

Hafidz,

Vallen

2024

Akuakultur

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“…However, the life history of those species can be traced by molecular analysis using DNA barcoding [16]. In addition, DNA barcoding can also be used as a tool for rapid species identification by using standardized genetic regions, and one or more genes in mitochondrial DNA [17]. One approved gene used to identify species is the cytochrome c oxidase subunit I (COI) gene found in mitochondrial DNA [18].…”

Section: Introductionmentioning

confidence: 99%

Unveiling the close relationship between Betta burdigala and Betta uberis through DNA barcoding based on COI Gene

Valen,

Bidayani,

Alfian

et al. 2023

IOP Conf. Ser.: Earth Environ. Sci.

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A Wild Betta burdigala is only known from Bangka Island, while a Wild Betta uberis resides in Kalimantan Tengah and Kalimantan Barat in Indonesia. Both species share numerous physical characteristics, particularly in the meristic count, body color, and specific habitat. In this study, we estimate the degree of similarity between Betta burdigala and Betta uberis using DNA barcoding based on the Cytochrome Oxidase Sub Unit I (COI) gene. The COI gene is a unique and small gene which found in mitochondrial DNA and is used in the DNA barcoding approach to identify species. This approach allows for the analysis of species similarities and the learning of the evolutionary histories of those species. Based on the COI gene, Betta burdigala and Betta uberis have a close genetic distance and a DNA similarity of 96.66%, much higher than other bettas. They differ by eight nucleotide bases, and their genetic distance is 0.04, while a genetic distance between 0.010 and 0.099 is considered to be low and indicative of high similarity. According to the phylogenetic tree, these species are descended from a single, closely related ancestor on the same branch. Based on the COI gene, we assume that they are identical. Additionally, we advise conducting additional research using the mitochondrial DNA complex and in-depth morphological examination to confirm the accuracy of the study’s findings.

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“…The COI gene has been selected as a standard tool for molecular taxonomy and identification of animals including fishes [15][16] [17]. The COI gene has been effectively used as a species identification tool for freshwater fish identification in Indonesia [18][19] [20][21]. DNA barcoding will be added to the Genbank NCBI database as a standard for identifying the Wild Betta foerschi species.…”

Section: Introductionmentioning

confidence: 99%

First record and phylogenetic relationship of the endangered species Betta foerschi (Vierke, 1979) (Anabantiformes : Osphronemidae) from Belitung Island, Indonesia

Syarif,

Valen,

Herjayanto

et al. 2023

IOP Conf. Ser.: Earth Environ. Sci.

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Betta foerschi (Vierke, 1979) is a betta fish group from the Osphronemidae family which is only known from Central and West Borneo Island, Indonesia. This species is classified as an Endangered (EN) by the IUCN Red List, where the population has recently been moderately decreased. The new distribution of B. foerschi fish has been found on Belitung Island based on morphological similarities. In this research, we report the first record and phylogenetic relationship of B. foerschi based on the DNA Barcoding method using the Cytochrome C Oxidase Subunit I (COI) gene from Belitung Island Indonesia. Additionally, the DNA barcoding for B. foerschi not only represents the first DNA record for Belitung Island, but also the first sequence reported in the Genbank database. The result showed that B. foerschi forms the same clade within the Osphronemidae family and Betta genus solidifying its position in this taxonomic group with the closest genetic distance that occurs between B. foerschi and B. persephone of 0.15 using the Maximum Composite Likelihood model analysis.

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Molecular phylogenetic of silver barb barbonymus gonionotus (bleeker, 1849) (cypriniformes: cyprinidae) in Java, Indonesia

Cited by 5 publications

References 18 publications

Kehadiran ikan invasif Nila Tilapia Oreochromis niloticus (Perciformes: cichlidae) di kepulauan Belitung, Indonesia

Kehadiran ikan invasif Nila Tilapia Oreochromis niloticus (Perciformes: cichlidae) di kepulauan Belitung, Indonesia

Unveiling the close relationship between Betta burdigala and Betta uberis through DNA barcoding based on COI Gene

First record and phylogenetic relationship of the endangered species Betta foerschi (Vierke, 1979) (Anabantiformes : Osphronemidae) from Belitung Island, Indonesia

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