“…Because of its ability to provide a global view, functional genomics is one of the most useful approaches for studying virus-host interactions. Our laboratory is using functional genomics to study a variety of viruses, including HCV, SIV/HIV, Ebola virus, HSV, SARS coronavirus, West Nile virus, and influenza virus (Baas et al, 2006a,b;Baskin et al, 2004;Fredericksen et al, 2004;Geiss et al, 2000Geiss et al, , 2001Geiss et al, , 2002Geiss et al, , 2003Kash et al, 2004Kash et al, , 2006aKobasa et al, 2007;Lederer et al, 2006;Pasieka et al, 2006;Smith et al, 2003aSmith et al, ,b, 2006Thomas et al, 2006;Walters et al, 2006Walters et al, , 2006a. This chapter will focus on how microarray technology is being utilized to uncover the mysteries of influenza pathogenesis.…”