The monoclonal antibody 109d6, which In most recent years, the utilization of monoclonal antibodies directed to major histocompatibility complex (MHC) products and the molecular cloning of their genes have contributed enormously to the elucidation of the nature of the polymorphism and of the genetic organization of the HLA region. Multiple genes and pseudogenes coding for at least seven human light chains (8) and at least six heavy chains (9) have been described. Biochemical and serological evidence allowed these HLA genes to be grouped into three subregions named DR (DR), DC (DQ), and SB (DP). (The descriptions in parentheses are those indicated for the DR, DC, and SB subregions at the recent Ninth International Histocompatibility Workshop.) However, an important set of related questions remains to be answered-i.e., what is the exact number of expressed loci for each subregion and, in regard to the serological and cellular definitions of these molecules, what is the distribution of antigenic determinants among the expressed products of these loci and the extent of the polymorphism within different subsets of class II molecules?Indeed, a structural polymorphism among DR4 homozygous cell lines of both DR4 and DC4 light chains has been recently reported (10). It is interesting that the degree of variation is higher for DR than for DC molecules, suggesting that products of different loci may display different degrees of polymorphism. No more than five alleles, for instance, have been described for the products of the SB loci (11). Supertypic specificities, as defined by alloantisera, represent the sharing of a determinant that, at the population level, segregates with two or more DR alleles. It is interesting to examine the molecules carrying these allospecificities to establish if the homology is limited to a single determinant or involves a broader part of the molecule. This paper focuses on the biochemical characterization of the MT3 supertypic specificity by two-dimensional gel electrophoresis, protein sequence, and Southern blot analysis and shows that a MT3-like determinant is carried by an identical subset of DR molecules shared between DR4 and DR7 homozygous cell lines. The NH2-terminal amino acid analysis of MT3 and DR4 ,B chains shows that the two molecules differ in their primary structure. Southern blot analysis of genomic DNA from cell lines homozygous for DR] through DR7 suggests that the sharing of MT3 between DR4 and DR7 haplotypes is part of a broader homology between the two haplotypes.
MATERIALS AND METHODSOne-and Two-Dimensional Gel Electrophoresis. The human lymphoblastoid B-cell lines were obtained from the Genetics Laboratory, Oxford University (Oxford, England), and were typed as part of the Seventh International Histocompatibility Workshop (Oxford, England) (12). The monoclonal antibodies L243, L227, LKT111, and 109d6 have been described (13)(14)(15)(16). Cells were labeled with the appropriate radioactive amino acid (1-2 mCi of 35S or 5 mCi of 3H, New England Nuclear; 1 Ci = 37 GBq...