2022
DOI: 10.3389/fimmu.2022.878271
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Molecular Determinants Regulating the Plasticity of the MHC Class II Immunopeptidome

Abstract: In the last few years, advancement in the analysis of the MHC class II (MHC-II) ligandome in several mouse and human haplotypes has increased our understanding of the molecular components that regulate the range and selection of the MHC-II presented peptides, from MHC class II molecule polymorphisms to the recognition of different conformers, functional differences in endosomal processing along the endocytic tract, and the interplay between the MHC class II chaperones DM and DO. The sum of all these variables … Show more

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Cited by 22 publications
(8 citation statements)
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“…Although it has been done previously ( 47 50 ), de-immunizing key amino acid residues requires extensive modeling to determine the nonamer cores ( 51 ) within the identified suspect sequences. Unlike the closed binding pocket of MHC class I, the MHC class II binding pocket is open and more flexible ( 52 ). Within the nonamer cores, determining anchor residues in the binding pocket or those protruding into the TCR for possible replacement, would be key to de-immunization.…”
Section: Discussionmentioning
confidence: 99%
“…Although it has been done previously ( 47 50 ), de-immunizing key amino acid residues requires extensive modeling to determine the nonamer cores ( 51 ) within the identified suspect sequences. Unlike the closed binding pocket of MHC class I, the MHC class II binding pocket is open and more flexible ( 52 ). Within the nonamer cores, determining anchor residues in the binding pocket or those protruding into the TCR for possible replacement, would be key to de-immunization.…”
Section: Discussionmentioning
confidence: 99%
“…The proprietary Cross-TAg Vector System ( Figure 7 ) adds sorting signals to a target protein as it is translated from the ivtRNA template in the cytosol of the DC. These sorting signals enable the protein to translocate to the endosomal-lysosomal pathway where peptides can be processed and selected by binding to class II HLA allotypes for transport to the cell surface, where they can activate CD4 T cells with complementary TCR ( 85 89 ).…”
Section: Module 2: Tcr Generationmentioning
confidence: 99%
“…In pathological conditions, changes in the dendritic cell MHC-antigen processing and presentation machinery can affect the selection, affinity, composition, and epitope copy number of the MHC-ligandome ( 27 30 ). This is associated with up-regulation in the costimulatory molecule and increased adjuvanticity of the tissue microenvironment, which can tilt the T reg /T conv balance and favor autoreactivity ( 30 , 31 ).…”
Section: Recognition Of the Mhc-self-peptidome: Conventional And Regu...mentioning
confidence: 99%