“…A total of 50,000 events collected for each sample were gated to , and 24 h) postinfection, cells were harvested for the isolation of total RNA (Qiagen, Valencia, CA) followed by treatment with DNase (rDNase I; Ambion, Inc., Austin, TX). The reverse transcription reaction was performed with 1 g of total RNA using Omniscript reverse transcriptase (4 U; Qiagen) in the presence of deoxynucleoside triphosphates (0.5 mM each deoxynucleoside triphosphate; Qiagen), oligo(dT) 15 primer (1 M; Promega, Madison, WI), and RNase inhibitor (10 U; Ambion). The kinetics of viral gene expression was examined by real-time PCR (RT-PCR) (ABI Prism 7700; Applied Biosystems, Foster City, CA).…”