Modelling morbidity for neglected tropical diseases: the long and winding road from cumulative exposure to long-term pathology
Anna Borlase,
Joaquin M. Prada,
Thomas Crellen
Abstract:Reducing the morbidities caused by neglected tropical diseases (NTDs) is a central aim of ongoing disease control programmes. The broad spectrum of pathogens under the umbrella of NTDs lead to a range of negative health outcomes, from malnutrition and anaemia to organ failure, blindness and carcinogenesis. For some NTDs, the most severe clinical manifestations develop over many years of chronic or repeated infection. For these diseases, the association between infection and risk of long-term pathology is gener… Show more
“…Although geometric means lead to biased estimators of the true mean, they have traditionally been used in the analysis of data from field studies [47]. We defined models as successful when they could i) reproduce a convex age-intensity curve with a typical peak of intensity of infection in adolescents, ii) bring the prevalence down of at least 20% of their pre-control levels after 10 years of MDA, and iii) result in a rebound of prevalence to values close to pre-control levels, after stopping MDA, even in low endemicity settings [1,[48][49][50]. After stopping MDA, we expect that the prevalence of infection in SAC should go back to pre-control levels within 20 years.…”
Background The transmission cycle of Schistosoma is remarkably complex, including sexual reproduction in the human hosts and asexual reproduction in the intermediate host (freshwater snails). Patterns of rapid recrudescence after treatment and stable low transmission are often observed, hampering the achievement of control targets. Current mathematical models commonly assume regulation of transmission to occur at worm level through density-dependent egg production. However, conclusive evidence on this regulating mechanism is weak, especially for S. mansoni. In this study, we explore the interplay of different regulating mechanisms and their ability to explain observed patterns in S. mansoni epidemiology. Methodology/Principal findings We developed SchiSTOP: a hybrid stochastic agent-based and deterministic modelling framework to reproduce S. mansoni transmission in an age-structured human population. We implemented different models with regulating mechanisms at: i) worm-level (density-dependent egg production), ii) human-level (anti-reinfection immunity), and iii) snail-level (density-dependent snail dynamics). Additionally, we considered two functional choices for the age-specific exposure to water bodies. We compared the ability of each model to reproduce observed epidemiological patterns pre- and post-control, and we compared the successful models in their predictions of the impact of school-based and community-wide treatment. Simulations confirmed that assuming at least one regulating mechanism is required to reproduce a stable endemic equilibrium. Snail-level regulation was necessary to explain stable low transmission. Only models combining snail- and human-level regulation with an age-exposure function informed with water contact data were successful in reproducing observed patterns. However, the predicted probability of reaching the control targets varied across successful models. Conclusions/Significance The choice of regulating mechanisms in schistosomiasis dynamics largely determines the model-predicted feasibility to reach control targets. Overall, the models that successfully explained observed patterns for S. mansoni suggest that reaching the control targets may be more challenging than currently thought. Conclusions highlight the importance of regulating mechanisms to be included in transmission models used for policy.
“…Although geometric means lead to biased estimators of the true mean, they have traditionally been used in the analysis of data from field studies [47]. We defined models as successful when they could i) reproduce a convex age-intensity curve with a typical peak of intensity of infection in adolescents, ii) bring the prevalence down of at least 20% of their pre-control levels after 10 years of MDA, and iii) result in a rebound of prevalence to values close to pre-control levels, after stopping MDA, even in low endemicity settings [1,[48][49][50]. After stopping MDA, we expect that the prevalence of infection in SAC should go back to pre-control levels within 20 years.…”
Background The transmission cycle of Schistosoma is remarkably complex, including sexual reproduction in the human hosts and asexual reproduction in the intermediate host (freshwater snails). Patterns of rapid recrudescence after treatment and stable low transmission are often observed, hampering the achievement of control targets. Current mathematical models commonly assume regulation of transmission to occur at worm level through density-dependent egg production. However, conclusive evidence on this regulating mechanism is weak, especially for S. mansoni. In this study, we explore the interplay of different regulating mechanisms and their ability to explain observed patterns in S. mansoni epidemiology. Methodology/Principal findings We developed SchiSTOP: a hybrid stochastic agent-based and deterministic modelling framework to reproduce S. mansoni transmission in an age-structured human population. We implemented different models with regulating mechanisms at: i) worm-level (density-dependent egg production), ii) human-level (anti-reinfection immunity), and iii) snail-level (density-dependent snail dynamics). Additionally, we considered two functional choices for the age-specific exposure to water bodies. We compared the ability of each model to reproduce observed epidemiological patterns pre- and post-control, and we compared the successful models in their predictions of the impact of school-based and community-wide treatment. Simulations confirmed that assuming at least one regulating mechanism is required to reproduce a stable endemic equilibrium. Snail-level regulation was necessary to explain stable low transmission. Only models combining snail- and human-level regulation with an age-exposure function informed with water contact data were successful in reproducing observed patterns. However, the predicted probability of reaching the control targets varied across successful models. Conclusions/Significance The choice of regulating mechanisms in schistosomiasis dynamics largely determines the model-predicted feasibility to reach control targets. Overall, the models that successfully explained observed patterns for S. mansoni suggest that reaching the control targets may be more challenging than currently thought. Conclusions highlight the importance of regulating mechanisms to be included in transmission models used for policy.
“…For these diseases, the association between infection and risk of long-term pathology is generally complex and poorly understood. The paper by Borlase et al in this volume discusses the challenges for determining the relationship between cumulative pathogen exposure and morbidity at the individual and population levels, drawing on case studies for trachoma, schistosomiasis and foodborne trematode infections, and explores potential frameworks for explicitly incorporating long-term morbidity into NTD transmission models [28]. These frameworks are crucial for quantifying burden of disease, and the paper by Ledien and colleagues presents a modelling pipeline from serological surveys to morbi-mortality models for Chagas disease (an IDM) to quantify disease burden in time and space [29].…”
Section: Infection and Morbiditymentioning
confidence: 99%
“…For this issue, NTD modellers have contributed seven papers (50% of the contributions), including the potential of alternative treatment strategies for accelerating programmatic action towards attaining interruption of transmission [ 9 ]; the design of NTD impact surveys [ 12 ]; the usefulness of current and novel tools for diagnosis of helminthiases in areas ranging from low to high prevalence [ 17 ]; the feasibility and challenges posed by NTDs with long incubation periods and diagnostic delays [ 20 ]; the impact of human movement on reaching and sustaining elimination efforts [ 27 ]; the relationship between cumulative exposure to infection and development of severe morbidity [ 28 ], and the use of serological surveys and force-of-infection models linked to frameworks of disease progression for quantifying spatio-temporal patterns of disease burden accounting for uncertainty at all steps of the proposed pipeline [ 29 ]. The linkage between NTD models and data have certainly improved considerably over the past decade, but lessons learnt from model construction on what should be measured to better understand the impact of given control interventions on infection, transmission and morbidity have yet to filter through to the practical design of most monitoring and evaluation programmes.…”
Twenty neglected tropical diseases (NTDs) are currently prioritised by the World Health Organization for eradication, elimination as a public health problem, elimination of transmission or control by 2030. This issue celebrates progress made since the 2012 London Declaration on NTDs and discusses challenges currently faced to achieve these goals. It comprises 14 contributions spanning NTDs tackled by intensified disease management to those addressed by preventive chemotherapy. Although COVID-19 negatively affected NTD programmes, it also served to spur new multisectoral approaches to strengthen school-based health systems. The issue highlights the needs to improve impact survey design, evaluate new diagnostics, understand the consequences of heterogeneous prevalence and human movement, the potential impact of alternative treatment strategies and the importance of zoonotic transmission.
This article is part of the theme issue ‘Challenges and opportunities in the fight against neglected tropical diseases: a decade from the London Declaration on NTDs’.
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