Abstract:Equine strongyles, the significant nematode pathogens of horses, are characterized by high quantities and species abundance, but classification of this group of parasitic nematodes is debated. Mitochondrial (mt) genome DNA data are often used to address classification controversies. Thus, the objectives of this study were to determine the complete mt genomes of three Cyathostominae nematode species (Cyathostomum catinatum, Cylicostephanus minutus, and Poteriostomum imparidentatum) of horses and reconstruct the… Show more
“…Species of genus Triodontophorus (T. brevicauda, T. serratus, and T. nipponicus) clustered together with species in subfamily Cyathostominae, although they belonged to subfamily Strongylinae. The dendrogram topology is highly congruent with previous studies (Gao. et al 2017;Li et al 2019).…”
The complete mitochondrial genome sequence of Coronocyclus labratus was sequenced in the present study. It was determined to be 13,856 bp in length, containing 12 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 2 non-coding regions. The nucleotide sequence data of 12 protein-coding genes of C. labratus and other 16 Strongylidae species were used for phylogenetic analyses. Coronocyclu labratus formed a monophyletic cluster with the remaining Strongylidae species. Coronocyclus genus was present in the same clade with high statistical support. The mitogenome sequences will facilitate taxonomy as well as systematic studies of Cyathostominae nematodes.
“…Species of genus Triodontophorus (T. brevicauda, T. serratus, and T. nipponicus) clustered together with species in subfamily Cyathostominae, although they belonged to subfamily Strongylinae. The dendrogram topology is highly congruent with previous studies (Gao. et al 2017;Li et al 2019).…”
The complete mitochondrial genome sequence of Coronocyclus labratus was sequenced in the present study. It was determined to be 13,856 bp in length, containing 12 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 2 non-coding regions. The nucleotide sequence data of 12 protein-coding genes of C. labratus and other 16 Strongylidae species were used for phylogenetic analyses. Coronocyclu labratus formed a monophyletic cluster with the remaining Strongylidae species. Coronocyclus genus was present in the same clade with high statistical support. The mitogenome sequences will facilitate taxonomy as well as systematic studies of Cyathostominae nematodes.
“…Phylogenetic analyses were conducted using two methods: Bayesian inference (BI) and maximum likelihood (ML) (Guindon & Gascuel, 2003; Ronquist & Huelsenbeck, 2003). Selected models and detailed process were as previously described in Gao et al (2017). Phylograms were drawn using Tree View v. 1.65 (Page, 1996).…”
Section: Methodsmentioning
confidence: 99%
“…In the early 1980s, cytological techniques distinguished P. equorum and P. univalens by the number of chromosomes, but this was not verified in a veterinary parasitology study (Jabbar et al , 2014). The mitochondrial (mt) genome has been widely used as a genetic marker in the identification and differentiation of closely related species (Lin et al , 2012; Liu et al , 2012; Gao et al , 2017). However, to date, only 14 mt genomes of horse parasitic nematodes have been reported.…”
Parascarosis is caused mainly by parasitic infections with Parascaris equorum and Parascaris univalens, the most common ascarid nematodes, in the small intestine of equines. Parascarosis often causes severe illness and even death in foals and yearlings. In this study, we obtained the complete sequence of the P. equorum mitochondrial (mt) genome and compared its organization and structure with that of P. equorum Japan isolate (nearly complete), and the complete mtDNA sequences of P. univalens Switzerland and USA isolates. The complete mtDNA genome of P. equorum China isolate is 13,899 base pairs (bp), making it the smallest of the four genomes. All four Parascaris mt genomes are circular, and all genes are transcribed in the same direction. The P. equorum mtDNA genome consists of 12 protein-coding genes, two ribosomal RNA genes, 22 transfer (t) RNA genes and one non-coding region, which is consistent with P. equorum Japan isolate and P. univalens Switzerland isolate but distinct from P. univalens USA isolate, which has 20 tRNA genes. Differences in nucleotide sequences of the four entire mt genomes range from 0.1-0.9%, and differences in total amino acid sequences of protein-coding genes are 0.2-2.1%. Phylogenetic analyses showed that the four Parascaris species clustered in a clade, indicating that P. equorum and P. univalens are very closely related. These mt genome datasets provide genetic evidence that P. equorum and P. univalens may represent the same species, which will be of use in further studies of the taxonomy, systematics and population genetics of ascarids and other nematodes.
“…Previous studies on Cyathostominae nematodes have focused mainly on their morphology, life history and epidemiology (Lichtenfels et al ., 2008; Stancampiano et al ., 2017), and thus genetic information is limited. Genetic markers, such as the internal transcribed spacer (ITS) of the nuclear ribosomal DNA region and mitochondrial genome sequences, have been used for the genetic classification and evolutionary analysis of cyathostomins (Hung et al ., 2000; Gao et al ., 2017a, b).…”
Section: Introductionmentioning
confidence: 99%
“…Cyathostominae nematodes are a complex nematode group, with 51 reported species. The mt genomes of only six Cyathostominae species ( Cylicostephanus goldi , Cylicostephanus minutus , Cylicocyclus nassatus , Cylicocyclus insigne , Cyathostomum catinatum and Poteriostomum imparidentatum ) have been sequenced to date (Gao et al ., 2017a, b). Cyathostomum pateratum is one of the most common cyathostomins in equine species, but there are insufficient mtDNA sequence data available to determine its phylogenetic relationships with other species.…”
The parasite Cyathostomum pateratum, which occurs in the large intestine of equines, is a common species of the subfamily Cyathostominae. Cyathostominae nematodes are a complex nematode group for which only limited genetic information has been reported. To re-examine the phylogenetic relationships among Cyathostominae nematodes, we sequenced the complete mitochondrial (mt) genome of Cy. pateratum and compared it with the mt genome of the congeneric species Cyathostomum catinatum. The complete mtDNA sequence of Cy. pateratum was 13,822 bp in length, 16 bp shorter than that of Cy. catinatum. The mtDNA sequences of both species contained 12 protein-coding genes, two rRNA genes and 22 tRNA genes, and all 36 genes were transcribed in the same direction and in the same strand. Pairwise comparisons of the 12 predicted amino acid sequences between Cy. catinatum and Cy. pateratum revealed differences of 0.4-3.1%; the least conserved sequence was that of cytochrome c oxidase subunit 3 (cox3). Phylogenetic analysis of the concatenated amino acid sequences using Bayesian inference and maximum likelihood methods showed that Cy. catinatum and Cy. pateratum clustered together with very high nodal support, and Cylicostephanus goldi was closer to the Cyathostomum nematodes than to other Cyathostominae nematodes. The mtDNA sequence of Cy. pateratum is reported here for the first time. The study will shed some light on the genetic evolution among parasitic nematodes in Cyathostomum.
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