BackgroundHuman mesenchymal stem cells (hMSCs) have been proven to have inherent chondrogenic differentiation potential, which appears to be used in cartilage regeneration. Increasing evidence suggests that irisin enhances osteoblast differentiation of MSCs, but little is known about its potential on chondrogenic differentiation. MethodsIn our study, we investigated the effects of irisin on chondrogenic differentiation of hMSCs, and detected the underlying mechanism using RNA-seq.ResultsCompared with the controls, irisin treatment could significantly enhance chondrogenic differentiation of hMSCs. RNA-seq results prompted that irisin treatment activated the Rap1 and PI3K/AKT signaling pathway. Further studies demonstrated that irisin treatment could up-regulate the expression level of miR-125b-5p, targeting SIPA1L2, consequently activating the Rap1/PI3K/AKT axis. ConclusionsCollectively, our study reveals that irisin can enhance chondrogenic differentiation of hMSCs via the Rap1/PI3K/AKT pathway, suggesting that irisin possesses prospects in cartilage regeneration.