The problem of optimal estimation of the linear functional A = ∑ ∞ k=0 a(k) (−k) depending on the unknown values of a stochastic sequence (m) with nth stationary increments from observations of the sequence (m) + (m) at points m = 0, −1, −2, …, where (m) is a stationary sequence uncorrelated with (m), is considered. Formulas for calculating the mean square error and the spectral characteristic of the optimal linear estimate of the functional are derived in the case where spectral densities of stochastic sequences are exactly known and admit the canonical factorizations. In the case of spectral uncertainty, where spectral densities are not known exactly, but sets of admissible spectral densities are specified, the minimax-robust method is applied. Formulas and relations that determine the least favourable spectral densities and the minimax-robust spectral characteristics are proposed for the given sets of admissible spectral densities. The filtering problem for a class of cointegrated sequences is investigated.The crucial assumption of application of traditional methods of finding solution to the filtering problem for random processes is that spectral densities of the processes are exactly known. However, in practical situations complete information on spectral densities is impossible and the established results cannot be directly applied to practical filtering problems. This is a reason to apply the minimax-robust method of filtering and derive the minimax estimates since they minimize the maximum value of the mean-square errors for all spectral densities from a given set of admissible densities simultaneously. In this article, we deal with the problem of optimal estimation of functionals depending on the unknown values of a random process with stationary increments based on observations of the process and a noise. In the case where spectral densities of the processes are not exactly known, relations for determining least favourable spectral densities and minimax-robust spectral characteristics are proposed.