Abstract:Microbial necromass is an important source and component of soil organic matter (SOM), especially within the most stable pools. Global change factors such as anthropogenic nitrogen (N), phosphorus (P), and potassium (K) inputs, climate warming, elevated atmospheric carbon dioxide (eCO 2 ), and periodic precipitation reduction (drought) strongly affect soil microorganisms and consequently, influence microbial necromass formation. The impacts of these global change factors on microbial necromass are poorly under… Show more
“…For instance, bacteria were shown to be favored in N enriched soils . This is consistent with N addition causing a decline in the microbial biomass C/N and fungi to bacteria ratios (F/B) via increasing soil N availability (Hu et al, 2023;Zhou et al, 2017). Therefore, under N addition, bacterial taxa with high relative abundance and rapid competition for resources to invest in growth may increase the proportion of Y-strategists within the soil community.…”
The soil microbial carbon pump (MCP) is increasingly acknowledged as being directly linked to soil organic carbon (SOC) accumulation and stability. Given the close coupling of carbon (C) and nitrogen (N) cycles and the constraints imposed by their stoichiometry on microbial growth, N addition might affect microbial growth strategies with potential consequences for necromass formation and carbon stability. However, this topic remains largely unexplored. Based on two multi‐level N fertilizer experiments over 10 years in two soils with contrasting soil fertility located in the North (Cambisol, carbon‐poor) and Southwest (Luvisol, carbon‐rich), we hypothesized that different resource demands of microorganism elicit a trade‐off in microbial growth potential (Y‐strategy) and resource‐acquisition (A‐strategy) in response to N addition, and consequently on necromass formation and soil carbon stability. We combined measurements of necromass metrics (MCP efficacy) and soil carbon stability (chemical composition and mineral associated organic carbon) with potential changes in microbial life history strategies (assessed via soil metagenomes and enzymatic activity analyses). The contribution of microbial necromass to SOC decreased with N addition in the Cambisol, but increased in the Luvisol. Soil microbial life strategies displayed two distinct responses in two soils after N amendment: shift toward A‐strategy (Cambisol) or Y‐strategy (Luvisol). These divergent responses are owing to the stoichiometric imbalance between microbial demands and resource availability for C and N, which presented very distinct patterns in the two soils. The partial correlation analysis further confirmed that high N addition aggravated stoichiometric carbon demand, shifting the microbial community strategy toward resource‐acquisition which reduced carbon stability in Cambisol. In contrast, the microbial Y‐strategy had the positive direct effect on MCP efficacy in Luvisol, which greatly enhanced carbon stability. Such findings provide mechanistic insights into the stoichiometric regulation of MCP efficacy, and how this is mediated by site‐specific trade‐offs in microbial life strategies, which contribute to improving our comprehension of soil microbial C sequestration and potential optimization of agricultural N management.
“…For instance, bacteria were shown to be favored in N enriched soils . This is consistent with N addition causing a decline in the microbial biomass C/N and fungi to bacteria ratios (F/B) via increasing soil N availability (Hu et al, 2023;Zhou et al, 2017). Therefore, under N addition, bacterial taxa with high relative abundance and rapid competition for resources to invest in growth may increase the proportion of Y-strategists within the soil community.…”
The soil microbial carbon pump (MCP) is increasingly acknowledged as being directly linked to soil organic carbon (SOC) accumulation and stability. Given the close coupling of carbon (C) and nitrogen (N) cycles and the constraints imposed by their stoichiometry on microbial growth, N addition might affect microbial growth strategies with potential consequences for necromass formation and carbon stability. However, this topic remains largely unexplored. Based on two multi‐level N fertilizer experiments over 10 years in two soils with contrasting soil fertility located in the North (Cambisol, carbon‐poor) and Southwest (Luvisol, carbon‐rich), we hypothesized that different resource demands of microorganism elicit a trade‐off in microbial growth potential (Y‐strategy) and resource‐acquisition (A‐strategy) in response to N addition, and consequently on necromass formation and soil carbon stability. We combined measurements of necromass metrics (MCP efficacy) and soil carbon stability (chemical composition and mineral associated organic carbon) with potential changes in microbial life history strategies (assessed via soil metagenomes and enzymatic activity analyses). The contribution of microbial necromass to SOC decreased with N addition in the Cambisol, but increased in the Luvisol. Soil microbial life strategies displayed two distinct responses in two soils after N amendment: shift toward A‐strategy (Cambisol) or Y‐strategy (Luvisol). These divergent responses are owing to the stoichiometric imbalance between microbial demands and resource availability for C and N, which presented very distinct patterns in the two soils. The partial correlation analysis further confirmed that high N addition aggravated stoichiometric carbon demand, shifting the microbial community strategy toward resource‐acquisition which reduced carbon stability in Cambisol. In contrast, the microbial Y‐strategy had the positive direct effect on MCP efficacy in Luvisol, which greatly enhanced carbon stability. Such findings provide mechanistic insights into the stoichiometric regulation of MCP efficacy, and how this is mediated by site‐specific trade‐offs in microbial life strategies, which contribute to improving our comprehension of soil microbial C sequestration and potential optimization of agricultural N management.
“…Resources derived from hyphae can increase microbial biomass, activity, frequency of interactions, and the rate of organic matter transformations (Sokol et al ., 2022). Necromass from these microbial cells is also likely a significant source of SOM and may have formed part of the mineral‐associated C that we recovered from the soil heavy fraction (Fossum et al ., 2022; Sokol et al ., 2022; Hu et al ., 2023). Future studies that compare the AMF hyphosphere with and without its microbiome would be needed to quantify this contribution.…”
Summary
Arbuscular mycorrhizal fungi (AMF) transport substantial plant carbon (C) that serves as a substrate for soil organisms, a precursor of soil organic matter (SOM), and a driver of soil microbial dynamics. Using two‐chamber microcosms where an air gap isolated AMF from roots, we 13CO2‐labeled Avena barbata for 6 wk and measured the C Rhizophagus intraradices transferred to SOM and hyphosphere microorganisms.
NanoSIMS imaging revealed hyphae and roots had similar 13C enrichment. SOM density fractionation, 13C NMR, and IRMS showed AMF transferred 0.77 mg C g−1 of soil (increasing total C by 2% relative to non‐mycorrhizal controls); 33% was found in occluded or mineral‐associated pools.
In the AMF hyphosphere, there was no overall change in community diversity but 36 bacterial ASVs significantly changed in relative abundance. With stable isotope probing (SIP)‐enabled shotgun sequencing, we found taxa from the Solibacterales, Sphingobacteriales, Myxococcales, and Nitrososphaerales (ammonium oxidizing archaea) were highly enriched in AMF‐imported 13C (> 20 atom%). Mapping sequences from 13C‐SIP metagenomes to total ASVs showed at least 92 bacteria and archaea were significantly 13C‐enriched.
Our results illustrate the quantitative and ecological impact of hyphal C transport on the formation of potentially protective SOM pools and microbial roles in the AMF hyphosphere soil food web.
“…In addition to MAOM, particulate organic matter (POM) containing plant-derived compounds is also a major part of stable C pool and may be precursors of MAOM with a short residence time (Angst et al, 2023;Lavallee et al, 2020). The efficient transformation of plant-derived C into more persistent microbially derived C increase the contribution of microbial necromass to the stable C pool, which was reported to be influenced by plant diversity (Bai & Cotrufo, 2022;Prommer et al, 2020;Zhu et al, 2020) and management strategies (Hu et al, 2023;Zhou et al, 2023). As native-vegetated coastal sediment microbiomes could facilitate the transformation of plant-derived C into microbially derived C, we propose that the native-vegetated coastal sediment microbiomes with high functional potentials of C, N and S cycling may promote the deposition of microbially derived C.…”
Section: Discussionmentioning
confidence: 99%
“…For instance, microbial necromass can account for more than 50% of stable soil organic C in agricultural, grassland and forest ecosystems (Liang et al, 2019;Wang, Qu, et al, 2021). The contribution of microbial necromass to stable C pool is determined by its recycling efficiency (Buckeridge et al, 2020), microbial death pathways (Camenzind et al, 2023), soil management (Hu et al, 2023;Luo et al, 2022;Zhou et al, 2023), soil depth (He, Fang, et al, 2022) and plant diversity (Bai & Cotrufo, 2022;Prommer et al, 2020;Zhu et al, 2020).…”
Coastal blue carbon (C) ecosystems are recognized as efficient natural C sinks and play key roles in mitigating global climate change. Microbially driven C, nitrogen (N) and sulphur (S) cycles are crucial for ecosystem functioning, but how microorganisms drive C sink formation and C sequestration in coastal sediments remains unclear.
In this study, we conducted a comprehensive analysis of amino sugars, C, N and S cycling genes/pathways and their associated taxa in coastal sediments of native (Cyperus malaccensis and Kandelia obovata) and alien (Spartina alterniflora and Sonneratia apetala) vegetation.
Compared to the alien‐vegetated coastal sediment, the native‐vegetated coastal sediment had significantly (p < 0.05) higher microbial necromass C and higher functional potentials of chemoautotrophic C fixation, C degradation, methane cycling, N2 fixation, S oxidation and sulphate reduction. Also, our analysis of coastal sediment microbiomes showed that S oxidation could be coupled with C fixation and/or nitrate/nitrite reduction. S oxidation, C degradation and C fixation were found to be key functional pathways for predicting sediment microbial necromass C. Additionally, the sulphur‐oxidizing Burkholderiales metagenome‐assembled genomes (MAGs) were a key functional group that dominated chemoautotrophic C fixation in coastal sediments.
These results suggested that chemoautotrophic S oxidizers, in particular Burkholderiales with a novel lineage, might be the key microbial group that dominates microbial necromass C formation in coastal sediments through microbial anabolism (C fixation);the coupling of microbially driven C, N and S cycling processes; and the deposition of microbially derived C. This study provides novel insights into the importance of chemoautotrophic S oxidizers for microbial necromass formation and shed new light on the microbial mechanism of C sink formation in coastal ecosystems, which also has important implications for enhancing C sequestration in coastal wetlands.
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