An X-ray Micro-Fluorescence (XRMF) spectrometer, with an analysis area of about 100 by 150 microns, has been used to collect 2-dimensional X-ray intensity maps over large-area (5 to 50 mm in X and Y) samples. These intensity maps were collected by scanning the sample on an XY stage, and converting X-ray Energy-Dispersive spectra to peak intensities for the elements of interest. The maps, when displayed using false-color or pseudogray scales, show the distribution of individual chemical elements over the analysis area. These maps can be collected at speeds from about 1 minute per frame (analysing 25 elements simultaneously). Greater precision of chemical intensities, or larger area maps, may require several hours, particularly if extensive data processing is performed at each point. XRMF has advantages over more conventional SEM-EDS X-ray mapping, including sample preparation and presentation, as well as improved signal-to-noise ratios.A technique is described which assists in analyzing the large amount of data which is collected in each map. Principal Component Analysis (PCA) is performed on all of the elemental maps simultaneously. This technique compresses the many elemental intensity maps into a few principal components, resulting in many fewer maps to evaluate. The intensity maps of these principal components display the most pertinent information. They can also be plotted as scatter plots which can help with the partitioning of the data into individual phases. This procedure can potentially be automated as a method for phase analysis. The selected pixels from the scatter plots can be averaged and converted into phase compositions, and the phase information re-displayed on the original elemental or principal component maps.This technique has been applied to a thin section of rock, and to a synthetic multiphase alloy sample.