Transcriptional regulatory protein
(TRP)-based whole-cell biosensors
are widely used nowadays. Here, they were demonstrated to have great
potential application in screening cell efflux and influx pumps for
small molecules. First, a vanillin whole-cell biosensor was developed
by altering the specificity of a TRP, VanR, and strains with improved
vanillin productions that were selected from a random genome mutagenesis
library by using this biosensor as a high-throughput screening tool.
A high intracellular vanillin concentration was found to accumulate
due to the inactivation of the AcrA protein, indicating the involvement
of this protein in vanillin efflux. Then, the application of this
biosensor was extended to explore efflux and influx pumps, combined
with directed genome evolution. Elevated intracellular vanillin levels
resulting from efflux pump inactivation or influx pump overexpression
could be rapidly detected by the whole-cell biosensor, markedly facilitating
the identification of genome targets related to small-molecule transmembrane
transport, which is of great importance in metabolic engineering.