Today, we face difficulty in generating new hypotheses and understanding oral lichen planus due to the large amount of biomedical information available. In this research, we have used an integrated bioinformatics approach assimilating information from data mining, gene ontologies, protein-protein interaction and network analysis to predict candidate genes related to oral lichen planus. A detailed pathway analysis led us to propose two promising therapeutic targets: the stromal cell derived factor 1 (CXCL12) and the C-X-C type 4 chemokine receptor (CXCR4). We further validated our predictions and found that CXCR4 was upregulated in all oral lichen planus tissue samples. Our bioinformatics data cumulatively support the pathological role of chemokines and chemokine receptors in oral lichen planus. From a clinical perspective, we suggest a drug (plerixafor) and two therapeutic targets for future research. Oral lichen planus (OLP) is a chronic immunologically mediated disease 1. Histopathological features of OLP include hyperkeratosis, acanthosis, degeneration by liquefaction of the basal keratinocyte layer, and prominent lymphocyte infiltration at the connective tissue-epithelium interface 2. OLP is not a homogeneous clinical entity, but a complex disease. A recent review proposes a new classification of this disease, taking into consideration a set of lesions with similar characteristics, including oral lichenoid contact lesions, oral lichenoid drug reactions, and lichen planus pemphigoides, among others 3 .The clinical findings vary from white reticular plaques to erythema, erosions, ulceration, and hyperkeratotic plaques in the oral mucosa 4. Although reticular lesions are often asymptomatic, burning or pain often accompanies erosive/ulcerative manifestations of OLP. The severity of pain may vary from mild to severe and may even interfere with patients' speech, feeding, and swallowing 4. According to the WHO, this disease has a potential for cancerization 5. This potential is presented in about 1% of patients 6. Despite the efforts in biomedical research, the etiology of OLP is unknown, and its molecular basis is still unclear. This may explain why the treatment is palliative. For these reasons, exploration of the mechanisms that govern the disease's pathophysiological process is needed. A disease is rarely the result of an abnormality in a single gene, but it reflects disturbances in the complex intracellular and intercellular network that links tissue and organ systems 7. Today, we face difficulty in generating new hypotheses and understanding OLP due to the large amount of biomedical information available. Encapsulating that information in an understandable way is one of the current challenges of network-based approaches to the study of human diseases 8. The heterogeneity of pathologies, the difficulty of finding a gene or protein in a certain localization, and the cost involved in experimental studies have led to the development of several in silico approaches for the identification of genes and proteins assoc...