Understanding when and how metal cofactor insertion occurs into a multisubunit metalloenzyme is of fundamental importance. Molybdenum cofactor insertion is a tightly controlled process that involves specific interactions between the proteins that promote cofactor delivery, enzyme-specific chaperones, and the apoenzyme. In the assembly pathway of the multisubunit molybdoenzyme, membrane-bound nitrate reductase A from Escherichia coli, a NarJassisted molybdenum cofactor (Moco) insertion step, must precede membrane anchoring of the apoenzyme. Here, we have shown that the NarJ chaperone interacts at two distinct binding sites of the apoenzyme, one interfering with its membrane anchoring and another one being involved in molybdenum cofactor insertion. The presence of the two NarJ-binding sites within NarG is required to ensure productive formation of active nitrate reductase. Our findings supported the view that enzyme-specific chaperones play a central role in the biogenesis of multisubunit molybdoenzymes by coordinating subunits assembly and molybdenum cofactor insertion.Molybdoenzymes are involved in numerous metabolic reactions in the carbon, nitrogen, and sulfur cycles and crucial for all forms of life (1). With the exception of nitrogenase, the active site of molybdoenzymes contains a molybdenum cofactor (Moco) 3 that has an ubiquitous basic structure composed of a molybdenum atom coordinated to one or two molecules of a tricyclic pyranopterin (2, 3). The past few years have seen spectacular advances in our understanding of the molecular mechanisms of Moco biosynthesis, a highly conserved biosynthetic pathway (4 -8). In contrast, information concerning biogenesis of molybdoenzymes is scarce. Molybdoenzyme biogenesis, the process that ensures productive formation of active molybdoenzymes, generally involves both metal cofactor insertion and multisubunit assembly. In prokaryotes, the Moco insertion process is a cytoplasmic post-translational event (9) often assisted by enzyme-specific chaperones (10 -13).Dissimilatory nitrate reductase A from Escherichia coli (NarGHI) is one of the best studied multisubunit molybdoenzymes (14) and can be considered as a model system for studying the biogenesis process in prokaryotic enzymes. NarGHI is a heterotrimeric enzyme comprising a Moco and an iron-sulfur-containing catalytic subunit (NarG, 139 kDa), an iron-sulfur-containing subunit (NarH, 58 kDa) and a quinol-oxidizing membrane-bound heme b subunit (NarI, 26 kDa) (14, 15). NarGH is located in the cytoplasm, anchored to the cytoplasmic membrane by NarI. When liberated from the membrane, the NarGH complex retains its activity using artificial electron donors such as benzyl viologen. Finally, the enzyme-specific chaperone NarJ plays an essential role for nitrate reductase A activity, facilitating Moco insertion into NarG (11).As observed for other known molybdoenzymes (16 -19), the crystal structure of the NarGHI complex (20, 21) reveals that Moco is an extended molecule deeply buried into the enzyme complex at the NarG-H ...