The mechanism on the electrochemical oxidation of bromide in the presence of ammonium ion was studied by cyclic voltammetry and in-situ UV-Vis spectroscopy. The results indicated that the anodically generated bromine (Br 2 ) would be hydrolyzed to hypobromous acid (HBrO) at the pH range of 5 -7 and was further disproportionate to hypobromite anion (BrO -) when pH was large than 7. Both HBrO and BrO -were confirmed to be participated in the following homogeneous chemical reaction with the ammonium ion co-existed in the electrolytic solution. However, HBrO is electroactive whereas BrO -is electroinactive at carbon electrode. Based upon the reaction of HBrO with ammonium ion, an indirect electrochemical method was proposed for determination of ammonium ion at pH 7 with dual-electrode configuration, where HBrO was produced at a generator electrode and the excess HBrO was subsequently detected at a collector electrode after a reaction with ammonium ion. It was demonstrated that ammonium ion concentrations were proportional to the decreasing of reduction current at the collector electrode either in a batch solution or in a micro flow injection analytical (micro-FIA) system using an interdigitated array (IDA) Pt microelectrode and a carbon film ring-disk electrode (CFRDE), with the detection limit below 3 Μ. This approach shows the advantage of highly selectivity even in presence of a large amount of co-existed cations.