The complex structure of the porous transport layer (PTLs), commonly referred to as gas diffusion layers (GDL), makes direct measurement of thermal transport properties difficult. Typically, effective thermal conductivity values are obtained experimentally and computational models are developed to replicate the measurements. This approach is sufficient for generalized one-dimensional models of fuel cell performance, but is not sufficient to predict reactant maldistribution due to the presence of liquid water in the PTL. Further, the anisotropy in the PTL structure results in dissimilar properties for through-plane and in-plane transport. In this work an analytical model is developed to extract material properties from effective thermal conductivity measurements. The model accounts for the change in the effective thermal conductivity as a function of compression. Geometric changes due to compression are separated from morphological changes using a compression modulation function; the shape of which is indicative of how fiber-to-fiber contact morphology changes with respect to strain. Material and morphological properties are determined using effective thermal conductivity data for three commercial PTLs. The properties also enable prediction of in-plane heat transfer using through-plane empirical data and also provide insight into morphological changes due to compression. A porous transport layer (PTL), more commonly referred to as a gas diffusion layer (GDL), has multiple purposes in a fuel cell including distribution of reactant gases to the catalyst layer, facilitation of product water removal from the catalyst layer, electronic and thermal conduction to/from the catalyst layer, and redistribution of compressive stresses across the membrane electrode assembly (MEA). A typical PTL consists of carbon fibers, either in fibrous or a non-woven morphology, along with binding agents and non-wetting agents such as polytetrafluoroethylene (PTFE). Examples of a non-woven and a fibrous PTL are shown in Figure 1. PTL designation is used herein because the transport phenomena of interest is not restricted to diffusion of reactant gases, but is focused heat transfer.Heat transfer across a dry PTL is primarily due to conduction. When liquid water is present, then additional heat may be transferred from the catalyst layer via evaporation and conduction via the liquid water occupying the void space. Either mode of heat transfer, conduction or evaporation, may be the dominant effect depending upon the operating conditions.1 The location of an evaporation front within a PTL depends upon the temperature and temperature gradient within the PTL. The same can be said for water condensation within the PTL as demonstrated by Caulk and Baker.2 A highly conductive PTL may increase the conduction of heat, but result in widely distributed condensation that can block reactant transport. A less conductive PTL may decrease the conduction of heat, but result in a sharp temperature gradient that generates a thin, uniform layer of water which al...