Abstract:The transmission of normal sensory and/or acute noxious information requires intact expression of pain-associated genes within the pain pathways of nervous system. Expressional changes of these genes after peripheral nerve injury are also critical for neuropathic pain induction and maintenance. Methyl-CpG-binding domain protein 1 (MBD1), an epigenetic repressor, regulates gene transcriptional activity. We report here that MBD1 in the primary sensory neurons of DRG is critical for the genesis of acute pain and … Show more
“…DNMT3a is a strong candidate for mediating increased levels of methylation of Cacna1b e37a locus in Trpv1 -lineage neurons. DNMT3a is upregulated in models of neuropathic pain and is associated with hypermethylation at promotor regions of neuronal genes including Oprm1 and Kcna2 (Mo et al, 2018; Zhao et al, 2017); we show that DNMT3a, but not DNMT1 or DNMT3b, shifts the pattern of Cacna1b e37a splicing in F11 cells. Global and highly localized changes in TET1 can also modify the methylation levels of exons (Liu et al, 2016; Liu et al, 2018; Marina et al, 2016) and, as we show for dCAS9-TET1 targeted to Cacna1b e37a, can promote the action of CTCF to shift the pattern of alternative splicing.…”
Cell-specific alternative splicing modulates myriad cell functions and this process is disrupted in disease. The mechanisms governing alternative splicing are known for relatively few genes and typically focus on RNA splicing factors. In sensory neurons, cell-specific alternative splicing of the presynaptic voltage-gated calcium channel Cacna1b gene modulates opioid sensitivity. How this splicing is regulated has remained unknown. We find that cell-specific exon DNA hypomethylation permits binding of CTCF, the master regulator of chromatin structure in mammals, which, in turn, controls splicing in noxious heat-sensing nociceptors.Hypomethylation of an alternative exon specifically in nociceptors allows for CTCF binding, and expression of CaV2.2 channels with increased opioid sensitivity. Following nerve injury, exon methylation is increased, and splicing is disrupted. Our studies define the molecular mechanisms of cell-specific alternative splicing of a functionally validated exon in normal and disease statesand reveal a potential target for the treatment of chronic pain.Highlights (each bullet not > 85 characters including spaces)• The molecular basis of cell-specific splicing of a synaptic calcium channel gene.• Splicing controlled by cell-specific exon hypomethylation and CTCF binding.• Peripheral nerve injury disrupts exon hypomethylation and splicing.• Targeted demethylation of exon by dCAS9-TET modifies alternative splicing.
“…DNMT3a is a strong candidate for mediating increased levels of methylation of Cacna1b e37a locus in Trpv1 -lineage neurons. DNMT3a is upregulated in models of neuropathic pain and is associated with hypermethylation at promotor regions of neuronal genes including Oprm1 and Kcna2 (Mo et al, 2018; Zhao et al, 2017); we show that DNMT3a, but not DNMT1 or DNMT3b, shifts the pattern of Cacna1b e37a splicing in F11 cells. Global and highly localized changes in TET1 can also modify the methylation levels of exons (Liu et al, 2016; Liu et al, 2018; Marina et al, 2016) and, as we show for dCAS9-TET1 targeted to Cacna1b e37a, can promote the action of CTCF to shift the pattern of alternative splicing.…”
Cell-specific alternative splicing modulates myriad cell functions and this process is disrupted in disease. The mechanisms governing alternative splicing are known for relatively few genes and typically focus on RNA splicing factors. In sensory neurons, cell-specific alternative splicing of the presynaptic voltage-gated calcium channel Cacna1b gene modulates opioid sensitivity. How this splicing is regulated has remained unknown. We find that cell-specific exon DNA hypomethylation permits binding of CTCF, the master regulator of chromatin structure in mammals, which, in turn, controls splicing in noxious heat-sensing nociceptors.Hypomethylation of an alternative exon specifically in nociceptors allows for CTCF binding, and expression of CaV2.2 channels with increased opioid sensitivity. Following nerve injury, exon methylation is increased, and splicing is disrupted. Our studies define the molecular mechanisms of cell-specific alternative splicing of a functionally validated exon in normal and disease statesand reveal a potential target for the treatment of chronic pain.Highlights (each bullet not > 85 characters including spaces)• The molecular basis of cell-specific splicing of a synaptic calcium channel gene.• Splicing controlled by cell-specific exon hypomethylation and CTCF binding.• Peripheral nerve injury disrupts exon hypomethylation and splicing.• Targeted demethylation of exon by dCAS9-TET modifies alternative splicing.
“…Functional locomotor activities in mice were assessed through three reflex tests as previously described Mo et al, 2018). (1) Placing reflex: The mice were held with the hind limbs slightly lower than the forelimbs, and the dorsal surfaces of the hindpaws were brought into contact with the edge of a table.…”
Section: Methodsmentioning
confidence: 99%
“…Control experiments for rabbit anti-DNMT1 included substitution of normal rabbit serum for the primary antiserum, omission of the primary antiserum, and preabsorption of the primary antibody with overdose of the antigen. The specificity of remaining primary antisera has been identified previously Shao et al, 2017;Sun et al, 2017;Xu et al, 2017;Zhao et al, 2017;Mo et al, 2018;Mao et al, 2019;Yuan et al, 2019). The sections finally mounted using VectaMount permanent mounting medium (Vector Laboratories) or Vectashield plus DAPI mounting medium (Vector Laboratories).…”
Section: Methodsmentioning
confidence: 99%
“…The specificity of rabbit anti-DNMT1 was examined in the following control experiments, including substitution of normal rabbit serum for the primary antiserum, omission of the primary antiserum, and preabsorption of the primary antibody with overdose of the antigen. The specificity of remaining primary antisera was reported previously (Lee et al, 2011;Zhao et al, 2013Zhao et al, , 2017Fan et al, 2014;Li et al, 2015Sun et al, 2017;Mo et al, 2018;Du et al, 2019;Mao et al, 2019) or from vendors' data sheets. Membranes were further incubated with anti-mouse or anti-rabbit HRP-conjugated secondary antibody (1: 3000, Jackson ImmunoResearch Laboratories) for 2 h at room temperature and visualized by Western peroxide reagent and luminol/enhancer reagent (Clarity Western ECL Substrate, Bio-Rad).…”
Section: Methodsmentioning
confidence: 99%
“…Conventionally, DNMT3a and DNMT3b function as de novo DNMTs to revers-ibly methylate unmethylated DNA, whereas DNMT1 is classified as the primary DNMT to maintain DNA methylation that has been established at the genome (Jeltsch, 2006;Siedlecki and Zielenkiewicz, 2006). The contribution of de novo DNMT3atriggered DNA methylation to neuropathic pain genesis was reported Shao et al, 2017;Sun et al, 2017;Zhao et al, 2017;Mo et al, 2018;Mao et al, 2019;Yuan et al, 2019). Expression of DNMT3a, but not DNMT3b, is increased in the injured DRG following peripheral nerve injury .…”
Expressional changes of pain-associated genes in primary sensory neurons of DRG are critical for neuropathic pain genesis. DNA methyltransferase (DNMT)-triggered DNA methylation silences gene expression. We show here that DNMT1, a canonical maintenance methyltransferase, acts as the de novo DNMT and is required for neuropathic pain genesis likely through repressing at least DRG Kcna2 gene expression in male mice. Peripheral nerve injury upregulated DNMT1 expression in the injured DRG through the transcription factor cAMP response element binding protein-triggered transcriptional activation of Dnmt1 gene. Blocking this upregulation prevented nerve injury-induced DNA methylation within the promoter and 5Ј-untranslated region of Kcna2 gene, rescued Kcna2 expression and total Kv current, attenuated hyperexcitability in the injured DRG neurons, and alleviated nerve injury-induced pain hypersensitivities. Given that Kcna2 is a key player in neuropathic pain, our findings suggest that DRG DNMT1 may be a potential target for neuropathic pain management.In the present study, we reported that DNMT1, a canonical DNA maintenance methyltransferase, is upregulated via the activation of the transcription factor CREB in the injured DRG after peripheral nerve injury. This upregulation was responsible for nerve injury-induced de novo DNA methylation within the promoter and 5Ј-untranslated region of the Kcna2 gene, reductions in Kcna2 expression and Kv current and increases in neuronal excitability in the injured DRG. Since pharmacological inhibition or genetic knockdown of DRG DNMT1 alleviated nerve injury-induced pain hypersensitivities, DRG DNMT1 contributes to neuropathic pain genesis partially through repression of DRG Kcna2 gene expression.
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