Context. Most of the missing baryons are found in slightly overdense structures like filaments and superclusters, but to date most of them have remained hidden to observations. Similarly, the linear cosmological perturbation theory predicts the existence of extended bulk flows seeded by gravitational attraction of linear potential wells, but again these remain undetected. Aims. Unveil the signature of bulk flows of the missing baryons in upcoming Cosmic Microwave Background (CMB) data. Methods. If the peculiar motion of galaxy groups and clusters indeed resembles that of the surrounding baryons, then the kinetic Sunyaev-Zel'dovich (kSZ) pattern of those massive halos should be closely correlated to the kSZ pattern of all surrounding electrons. Likewise, it should also be correlated to the CMB E-mode polarization field generated via Thomson scattering after reionization. We explore the cross-correlation of the kSZ generated in groups and clusters to the all sky E-mode polarization in the context of upcoming CMB experiments like Planck, ACT, SPT or APEX. Results. We find that this cross-correlation is effectively probing redshifts below z = 3 − 4 (where most of baryons are missing), and that it arises in the very large scales (l < 10). The significance with which this cross-correlation can be measured depends on the Poissonian uncertainty associated to the number of halos where the kSZ is measured and on the accuracy of the kSZ estimations themselves. Assuming that Planck can provide a cosmic variance limited E-mode polarization map at l < 20 and S/N ∼ 1 kSZ estimates can be gathered for all clusters more massive than 10 14 M ⊙ , then this cross-correlation should be measured at the 2-3 σ level. Further, if an all-sky ACT or SPT type CMB experiment provides kSZ measurements for all halos above 10 13 M ⊙ , then the cross-correlation signal to noise (S/N) ratio should be at the level of 4-5. A detection of this cross-correlation would provide direct and definite evidence of bulk flows and missing baryons simultaneously.