Escherichia coli swims by spinning its four to eight flagella (1, 38), which are distributed randomly around the surface of the cell (28). When the flagella turn counterclockwise (CCW), the left-handed helical flagellar filaments coalesce into a bundle that pushes the cell in a gently curved path known as a run. When one or more flagella rotate clockwise (CW), the bundle comes apart (29, 49) and the cells undergo sudden, random changes in direction that are called tumbles. Alternation of CCW and CW flagellar rotation produces a series of runs and tumbles that generates a three-dimensional random walk. Suppression of CW rotation by signals from chemoreceptors enables a cell to migrate up an attractant gradient or down a repellent gradient (41).Most of the ϳ40 flagellar proteins are involved in the assembly of the basal body, hook, and filament. Three proteins have been shown to be directly involved in torque generation: MotA, MotB, and FliG. Null mutations in motA and motB produce paralyzed flagella (3, 4). MotA and MotB are located in the cell membrane (36) surrounding the MS ring (2 2), and they form the transmembrane channel that delivers protons to the motor (3,4,5,42,51). The large C-terminal periplasmic domain of MotB has a putative peptidoglycan-binding domain that is believed to anchor the Mot proteins to the peptidoglycan cell wall (9,11,17,51).FliG is mounted on the cytoplasmic face of the MS ring (15), which is composed of the single polypeptide FliF (50). FliG also contacts the C ring, which contains FliM and FliN (16,21,34). FliG, FliM, and FliN form the switch-motor complex (52), which is required for torque generation, flagellar assembly, and switching the direction of flagellar rotation (19,39,53).FliG from E. coli (FliG Ec contains 330 residues and can be separated into two stable, overlapping domains (25). A fliG mutant with a stop codon at position 246 has paralyzed flagella, whereas a ⌬fliG strain is not flagellated. Certain charged residues in the carboxyl-terminal region of FliG are essential for motility (26) and interact electrostatically with residues of opposite charge (55) in the cytoplasmic loop between transmembrane helices 2 and 3 of MotA (54). The picture of FliG that has emerged is that the amino-terminal region of FliG is required for flagellar assembly, whereas the carboxyl-terminal domain of FliG is required for torque generation.The C-terminal 126 residues of E. coli FliG can be expressed as a stable, soluble cytoplasmic fragment (25). The crystal structure of the C-terminal motility domain of FliG from Thermotoga maritima (FliG Tm ) has been determined (27). A more recent publication describes the structure of a larger C-terminal region that includes the putative hinge between the domains (8).The FliM protein plays an essential role in switching between CCW and CW rotation (39,44,47). FliM interfaces with the chemotactic circuit via the response regulator CheY (7,33,48). The default direction of the motor is CCW, and binding of CheY-phosphate (2) or a mutationally activated fo...