Marmoset Brain Mapping V3: Population multi-modal standard volumetric and surface-based templates

Liu, Cirong; Yen, Cecil Chern-Chyi; Szczupak, Diego; Tian, Xiaoguang; Glen, Daniel R.; Silva, Afonso C.

doi:10.1016/j.neuroimage.2020.117620

Cited by 57 publications

(103 citation statements)

References 38 publications

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“…Approximate locations of parietal, auditory and frontal regions are indicated green, purple, and white dashed lines on the flat maps, respectively. The volume-of-interests (VOIs) in visual-related areas were manually created based on the multi-modal cortical parcellation atlas (Glasser et al, 2016) for humans and Paxinos atlas for marmosets (Liu et al, 2021), so as not to include the low correlation areas among scans (r < 0.2) (G for humans, and H for marmosets). Then, the time courses were extracted from two VOIs (e.g.…”

Section: Figmentioning

confidence: 99%

“…To identify the intra-and inter-species functional correspondence in early and high-order visual areas, we created the volume-of-interests (VOIs) based on the inter-scan correlation maps (r > 0.2) using the multi-modal cortical parcellation atlas (Glasser et al, 2016) for humans and the Paxinos atlas for marmosets (Liu et al, 2021) (Fig. 1G and 1H; please see the Suppl.…”

Section: Intra-and Inter-species Functional Correspondencementioning

confidence: 99%

“…The maps were focused on the areas around the occipital regions (areas surrounded by blue squares in the top left panels) in left hemispheres. White lines indicate the borders of the multi-modal cortical parcellation atlas (Glasser et al, 2016) for humans and Paxinos atlas for marmosets (Liu et al, 2021).…”

Section: Figmentioning

confidence: 99%

“…The peak locations of human (A) and marmoset (B) correlation maps with the time course in each marmoset parietal volume-of-interest (VOI) (presented by red or blue labels). White lines indicate the borders of the multi-modal cortical parcellation atlas (Glasser et al, 2016) for humans and Paxinos atlas for marmosets (Liu et al, 2021) AIP: anterior intraparietal area; LIP: lateral intraparietal area; MIP: medial intraparietal area; OPt: occipito-parietal transitional area; VIP: ventral intraparietal area…”

Section: Figmentioning

confidence: 99%

“…Data was preprocessed using FSL software (Smith et al, 2004). Raw MRI images were first converted to Neuro Informatics Technology Initiative (NIfTI) format (Li et al, 2016), and brain masks were created using the population-based brain template (MNI152 template for humans; MBM template for marmosets (Liu et al, 2021)). The brain-skull boundary was roughly identified from individual anatomical images using the brain extraction tool (FSL; BET) (Smith, 2002).…”

Section: Image Preprocessingmentioning

confidence: 99%

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Interspecies activation correlations reveal functional correspondences between marmoset and human brain areas

Hori

Cléry

Schaeffer

et al. 2021

Preprint

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The common marmoset has enormous promise as a nonhuman primate model of human brain functions. While resting-state functional magnetic resonance imaging (fMRI) has provided evidence for a similar organization of marmoset and human cortices, the technique cannot be used to map the functional correspondences of brain regions between species. This limitation can be overcome by movie-driven fMRI (md-fMRI), which has become a popular tool for non-invasively mapping the neural patterns generated by rich and naturalistic stimulation. Here, we used md-fMRI in marmosets and humans to identify whole-brain functional correspondences between the two primate species. In particular, we describe functional correlates for the well-known human face, body, and scene patches in marmosets. We find that these networks have a similar organization in both species, suggesting a largely conserved organization of higher-order visual areas between New World marmoset monkeys and humans. However, while face patches in humans and marmosets were activated by marmoset faces, only human face patches responded to the faces of other animals. Together, the results demonstrate that md-fMRI is a powerful tool for interspecies functional mapping and characterization of higher-order visual functions.

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Section: Figmentioning

confidence: 99%

Section: Intra-and Inter-species Functional Correspondencementioning

confidence: 99%

Section: Figmentioning

confidence: 99%

Section: Figmentioning

confidence: 99%

Section: Image Preprocessingmentioning

confidence: 99%

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Interspecies activation correlations reveal functional correspondences between marmoset and human brain areas

Hori

Cléry

Schaeffer

et al. 2021

Preprint

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Diffusion MRI data, sulcal anatomy, and tractography for eight species from the Primate Brain Bank

et al. 2021

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Large-scale comparative neuroscience requires data from many species and, ideally, at multiple levels of description. Here, we contribute to this endeavor by presenting diffusion and structural MRI data from eight primate species that have not or rarely been described in the literature. The selected samples from the Primate Brain Bank cover a prosimian, New and Old World monkeys, and a great ape. We present preliminary labelling of the cortical sulci and tractography of the optic radiation, dorsal part of the cingulum bundle, and dorsal parietal–frontal and ventral temporal-frontal longitudinal white matter tracts. Both dorsal and ventral association fiber systems could be observed in all samples, with the dorsal tracts occupying much less relative volume in the prosimian than in other species. We discuss the results in the context of known primate specializations and present hypotheses for further research. All data and results presented here are available online as a resource for the scientific community.

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Primate Models as a Translational Tool for Understanding Prenatal Origins of Neurodevelopmental Disorders Associated With Maternal Infection

Ryan¹,

Bauman²

2022

Biological Psychiatry: Cognitive Neuroscience and Neuroimaging

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Marmoset Brain Mapping V3: Population multi-modal standard volumetric and surface-based templates

Cited by 57 publications

References 38 publications

Interspecies activation correlations reveal functional correspondences between marmoset and human brain areas

Interspecies activation correlations reveal functional correspondences between marmoset and human brain areas

Diffusion MRI data, sulcal anatomy, and tractography for eight species from the Primate Brain Bank

Primate Models as a Translational Tool for Understanding Prenatal Origins of Neurodevelopmental Disorders Associated With Maternal Infection

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