We have fractionated porcine heparin species of low molecular weight, with an average specific anticoagulant activity of 96 units/mg by affinity chromotography. Highly active and relatively inactive preparations of similar size were obtained with specific anticoagulant activities of 360 and 4 units/mg, respectively. The highly active heparin fraction possesses 1.1 additional residues of glucuronic acid and 1.5 fewer residues of N-sulfated glucosamine per molecule compared to the relatively inactive species. This decrease in N-sulfated glucosamine appears to be secondary to a corresponding increase in N-acetylated glucosamine. This form also contains a tetrasaccharide sequence with a N-sulfated glucosamine at its reducing end as well as equivalent amounts of glucuronic acid and iduronic acid. Furthermore, the internal glucosamine residue of this sequence appears to be N-acetylated. Sufficient amounts of this tetrasaccharide sequence are present within the highly active preparation such that each molecule may be endowed with this structure. The relatively inactive product contains a significantly decreased quantity of this tetrasaccharide sequence such that only £-20% of these molecules may possess this structure. The mean distance between nonsulfated uronic acid residues of the highly active species is smaller than that separating similar residues of the relatively inactive product. In addition, a larger number of the nonsulfated uronic acid residues of the highly active material appears either to be present in a restricted region of the molecule separated only by glucosamine residues or to be located at penultimate positions within the polysaccharide chain.Heparin functions as an anticoagulant by binding to antithrombin and accelerating the rate at which this protein inactivates the serine proteases of the hemostatic mechanism (1). During the last 60 years, a number of investigators have attempted to define the chemical and physical features of heparin that are responsible for its anticoagulant action. However, the precise relationship between the structure of the mucopolysaccharide and its biologic properties has remained elusive. A communication from our laboratory provided evidence that only a small fraction (25-35%) of a given heparin preparation binds tightly to antithrombin and is responsible for 85-95% of the anticoagulant activity (2). This finding engendered the hope that, once the active fraction was carefully examined, a unique structure-function relationship for heparin would emerge. The existence of active and relatively inactive heparin species has been confirmed by Lindahl and his coworkers (3). Unfortunately, these investigators were unable to find any chemical parameters that distinguished between their two heparin fractions (3).
MATERIALS AND METHODSHuman antithrombin and human thrombin were both isolated by methods previously reported from our laboratory (4). Two porcine heparin products were utilized as starting material forThe costs of publication of this article were defrayed in pa...