1Under stressful conditions some microorganisms adopt a reversible non or slow proliferative 2 quiescent stage that allows their survival. Although quiescence has been described broadly in bacteria, 3 this phenotype has been only recently discovered in Leishmania. In the present work we developed a 4 biosensor of quiescence that allows to monitor the physiological stage of the parasite at population 5 and single cell levels. We inserted a GFP gene into the ribosomal DNA locus and followed the 6 expression of this reporter gene, driven by the ribosomal promotor (rGFP expression). We showed 7 that rGFP expression decreased significantly and rapidly during the in vitro transition from 8 extracellular promastigotes to intracellular amastigotes of L. mexicana an L. braziliensis and that the 9 decrease in rGFP expression was coupled in vitro with a decrease in replication as measured by BrdU 10 incorporation. Quiescence was not only observed in reference laboratory strains, but also among 11 clinical isolates. We found that quiescence was reversible as the parasites could rapidly resume their 12 metabolically active and proliferative stage when they were put back in an optimal environment for 13 growth. We demonstrated for the first time in live cells that amastigotes are a heterogeneous 14 population in which shallow and deep quiescent stages may coexist. Finally, we showed that rGFP 15 expression could be monitored in vivo and that quiescent amastigotes could reside in tissues of 16 animals with latent infections of L. braziliensis or L. mexicana. We propose rGFP expression as a 17 simple parameter to define quiescent cells and further characterize them. 18 3 IMPORTANCE 19Quiescence is a physiological diversification that allows pathogens to overcome chemotherapy 20 without the development of drug resistance and to be invisible to the immune system of their host. 21 Quiescent pathogens can cause latent infections and (re-) emerge in an unpredictable time during the 22 lifetime of the individual. The phenomenon was recently described in Leishmania in which it could 23 explain several clinical and sub-clinical features, like therapeutic failure, reactivation of the disease 24 and asymptomatic infections. However, a simple biosensor of quiescence for Leishmania is not yet 25available. We show for the first time that the integration of GFP within the rDNA locus and the 26 subsequent quantification of its expression can be used as a biosensor to distinguish quiescent 27 subpopulations among live amastigotes. Moreover, we show quiescence is quickly reversible both in 28 vivo and in vitro. We offer a tool that will allow the further molecular characterization of quiescent 29 parasites. 30 4 31 Leishmania is a digenetic parasite involving two life stages. The motile promastigotes reside in the 32 invertebrate sand fly and the non-motile amastigotes reside within the parasitophorous vacuole of the 33 macrophage and other phagocytic cells (1-3). In the mammalian host the parasite can produce a broad 34 spectrum of clinical ...