m⁶A modifications of circular RNAs in ischemia-induced retinal neovascularization

Abstract

Ischemia-induced pathological neovascularization in the retina is a leading cause of blindness in various age groups. The purpose of the current study was to identify the involvement of circular RNAs (circRNAs) methylated by N 6 -methyladenosine (m 6 A), and predict their potential roles in oxygen-induced retinopathy (OIR) in mice. Methylation assessment via microarray analysis indicated that 88 circRNAs were differentially modified by m 6 A methylation, including 56 hyper-methylated circRNAs and 32 hypo-methylated circRNAs. Gene ontology enrichment analysis predicted that the enriched host genes of the hyper-methylated circRNAs were involved in cellular process, cellular anatomical entity, and protein binding. Host genes of the hypo-methylated circRNAs were enriched in the regulation of cellular biosynthetic process, the nucleus, and binding. According to the Kyoto Encyclopedia of Genes and Genomes analysis, those host genes were involved in the pathways of selenocompound metabolism, salivary secretion, and lysine degradation. MeRIP-qPCR verified significant alterations in m 6 A methylation levels of mmu_circRNA_33363, mmu_circRNA_002816, and mmu_circRNA_009692. In conclusion, the study revealed the m 6 A modification alterations in OIR retinas, and the findings above shed light on the potential roles of m 6 A methylation in circRNA regulatory functions in the pathogenesis of ischemia-induced pathological retinal neovascularization.

N6-methyladenosine methylation in ophthalmic diseases: From mechanisms to potential applications

“…1 ). For example, as a classical model for retinal angiogenesis, a mouse model of oxygen-induced retinopathy (OIR) shows significant differences of m 6 A modification in mRNA, circRNA, and lncRNA compared to the control group [ 25 , 26 ].

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