Protein phosphatase 2A (PP2A) is regulated through a variety of mechanisms, including post-translational modifications and association with regulatory proteins. Alpha4 is one such regulatory protein that binds the PP2A catalytic subunit (PP2Ac) and protects it from polyubiquitination and degradation. Alpha4 is a multidomain protein with a C-terminal domain that binds Mid1, a putative E3 ubiquitin ligase, and an N-terminal domain containing the PP2Ac-binding site. In this work, we present the structure of the N-terminal domain of mammalian Alpha4 determined by x-ray crystallography and use double electronelectron resonance spectroscopy to show that it is a flexible tetratricopeptide repeat-like protein.
PP2A3 is a ubiquitous serine/threonine phosphatase involved in the regulation of numerous cell signaling pathways and cellular functions, including proliferation, cytoskeletal rearrangement, apoptosis, and cell migration (1-3). Several pathologies have been linked to dysregulation of PP2Ac, including Alzheimer disease, cancer, and diabetes (4 -8). The activity of PP2Ac is tightly controlled in vivo via association with regulatory subunits, interactions with other cellular proteins, and various post-translational modifications (9 -12). PP2A regulatory subunits play a critical role in determining phosphatase activity and substrate selectivity, as well as directing the subcellular localization of the PP2A holoenzyme (3). PP2A exists primarily as a heterotrimeric holoenzyme consisting of a structural A-subunit, a variable regulatory B-subunit, and PP2Ac. However, an atypical pool of PP2Ac exists in complex with the regulatory subunit Alpha4 that binds directly to PP2Ac in the absence of the A-and B-subunits (13-16). Recent studies have shown that Alpha4 plays a crucial role in the control of PP2A ubiquitination and stability (12,17,18).Alpha4, a multidomain protein with similarity to Tap42 from yeast, was initially discovered as a 52-kDa phosphoprotein in B-cell receptor complexes (16,19). Both Alpha4 and Tap42 consist of an N-terminal domain that contains the residues important for PP2Ac binding (20) and a C-terminal domain that is protease-sensitive and intrinsically disordered (21). The C-terminal domain of Alpha4 binds Mid1, a putative E3 ligase (12,22). Alpha4 regulates all three type 2A protein phosphatases (PP2Ac, PP4, and PP6), modulating both catalytic activity and expression levels (13,14,17,23). In addition to its association with PP2A family members, Alpha4 associates and co-localizes with Mid1, a putative E3 ubiquitin ligase thought to facilitate PP2Ac polyubiquitination (12,22). The C terminus of Alpha4 and the B-box1 domain of the Mid1 protein mediate the association between Mid1 and Alpha4 (12,22). Mutations in Mid1 have been linked to Opitz syndrome, a developmental disorder (24,25). At the cellular level, mutations in Mid1 lead to decreases in ubiquitination and degradation of PP2Ac, especially microtubule-associated PP2Ac (12, 26).Alpha4 serves as a scaffold for PP2Ac and Mid1 and protects PP2Ac fr...