Antenna systems of plants and green algae are made up of pigment-protein complexes belonging to the light-harvesting complex (LHC) multigene family. LHCs increase the light-harvesting cross-section of photosystems I and II and catalyze photoprotective reactions that prevent light-induced damage in an oxygenic environment. The genome of the moss Physcomitrella patens contains two genes encoding LHCb9, a new antenna protein that bears an overall sequence similarity to photosystem II antenna proteins but carries a specific motif typical of photosystem I antenna proteins. This consists of the presence of an asparagine residue as a ligand for Chl 603 (A5) chromophore rather than a histidine, the common ligand in all other LHCbs. Asparagine as a Chl 603 (A5) ligand generates red-shifted spectral forms associated with photosystem I rather than with photosystem II, suggesting that in P. patens, the energy landscape of photosystem II might be different with respect to that of most green algae and plants. In this work, we show that the in vitro refolded LHCb9-pigment complexes carry a red-shifted fluorescence emission peak, different from all other known photosystem II antenna proteins. By using a specific antibody, we localized LHCb9 within PSII supercomplexes in the thylakoid membranes. This is the first report of red-shifted spectral forms in a PSII antenna system, suggesting that this biophysical feature might have a special role either in optimization of light use efficiency or in photoprotection in the specific environmental conditions experienced by this moss.Light energy powers photosynthesis. Sunlight is absorbed by chlorophyll (Chl) 2 and carotenoid molecules bound to protein supercomplexes embedded in thylakoid membranes, called photosystem I and II (PSI and PSII). Each photosystem has two moieties: (i) the core complex and (ii) the peripheral antenna system. The core complex contains mostly plastid-encoded subunits, which are responsible for charge separation and for the first steps of electron transport and are also active in light harvesting. An additional antenna system, made of nucleusencoded subunits binding Chl a, Chl b, and xanthophylls, is localized peripherally in photosystems and is responsible for most light harvesting, transfer of excitation energy to the reaction centers, and photoprotective reactions like ROS scavenging and quenching of triplet and singlet excited states (1-3). Reaction center protein sequences are widely conserved among organisms, and only small differences are found in sequences of oxygenic organism as far apart as higher plants and cyanobacteria (4, 5). Antenna systems are instead more variable, and in land plants and green algae, they are composed of multiple copies of light-harvesting complex (LHC) proteins (4) assembled around core complexes (6). Clustering analysis of LHC protein sequences clearly distinguishes members associated with PSI (LHCa or LHCI) from those belonging to PSII (LHCb or LHCII) (7). In Arabidopsis thaliana, six different polypeptides were identified for...