The neuronal ELAV-like RNA-binding protein HuD binds to a regulatory element in the 3-untranslated region of the growth-associated protein-43 (GAP-43) mRNA. Here we report that overexpression of HuD protein in PC12 cells stabilizes the GAP-43 mRNA by delaying the onset of mRNA degradation and that this process depends on the size of the poly(A) tail. Using a polysomebased in vitro mRNA decay assay, we found that addition of recombinant HuD protein to the system increased the half-life of full-length, capped, and polyadenylated GAP-43 mRNA and that this effect was caused in part by a decrease in the rate of deadenylation of the mRNA. This stabilization was specific for GAP-43 mRNA containing the HuD binding element in the 3-untranslated region and a poly(A) tail of at least 150 A nucleotides. In correlation with the effect of HuD on GAP-43 mRNA stability, we found that HuD binds GAP-43 mRNAs with long tails (A150) with 10-fold higher affinity than to those with short tails (A30). We conclude that HuD stabilizes the GAP-43 mRNA through a mechanism that is dependent on the length of the poly(A) tail and involves changes in its affinity for the mRNA.The growth-associated protein GAP-43 is a neuronal-specific phosphoprotein that is expressed primarily in neurons during both the initial axonal outgrowth and remodeling of synaptic connections for reviews (1-3). The expression of GAP-43 is complex and features both transcriptional and post-transcriptional components (4 -11). Transcriptional factors of the basic helix-loop-helix family are known to control the neural specific expression of the GAP-43 gene (12,13). Yet, and most surprisingly, in several instances, the levels of gene transcription do not correlate well with the accumulation of the mature GAP-43 mRNA (8,9,11,14,15). In PC12 cells induced to differentiate by nerve growth factor, GAP-43 mRNA levels are regulated primarily through selective changes in the rate of degradation of the mRNA (9). This process depends on the activation of protein kinase C and is mediated by the interaction of highly conserved sequences in the 3Ј-untranslated region (3Ј-UTR) 1 of the mRNA with neuronal-specific RNA-binding proteins (16). One of these proteins was identified as the ELAV-like protein HuD (10, 17). Blocking endogenous HuD expression using antisense RNA was found to decrease the levels of the GAP-43 mRNA and protein in PC12 cells and to limit process outgrowth (18). In contrast, overexpression of HuD in PC12 cells causes an increase in GAP-43 protein levels and cellular differentiation, even in the absence of nerve growth factor (19). In light of these observations, we proposed that HuD is the main regulatory protein involved in the post-transcriptional regulation of the GAP-43 gene.HuD belongs to the highly conserved elav (embryonic lethal abnormal vision) family of RNA-binding proteins (20,21). HuD is one of four mammalian ELAV-like proteins that have been identified, three of which are exclusively expressed in the nervous system. These proteins contain three RNA recog...