Abstract:This longitudinal prospective study aimed to determine the prevalence of oropharyngeal colonization by C. albicans in children with cystic fibrosis (CF), and observe the continuity of candidal colonization and the changes in production of virulence factors, susceptibility to antifungal agents and RAPD patterns of the isolates. Thirty-seven children with CF were followed-up for oropharyngeal C. albicans colonization for 18 months. The colonization rate was detected in 54%. All isolates were susceptible to ampho… Show more
“…One approximation for this study was to interpret the blood isolates as surrogate markers for baseline colonization and to compare this to subsequent oral colonization. Genotyping revealed a 90% genetic correlation for species acquired from both sites, supporting the general concept that the invasive species was also a colonizing agent, as previously shown (15,(37)(38)(39)(40). In addition, the MIC data for paired blood and oral isolates mirrored those for the overall isolate collection for both C. albicans and C. glabrata.…”
The prevalence of intrinsic and acquired resistance among colonizing Candida isolates from patients after candidemia was investigated systematically in a 1-year nationwide study. Patients were treated at the discretion of the treating physician. Oral swabs were obtained after treatment. Species distributions and MIC data were investigated for blood and posttreatment oral isolates from patients exposed to either azoles or echinocandins for <7 or >7 days. Species identification was confirmed using matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) and internal transcribed spacer (ITS) sequencing, susceptibility was examined by EUCAST EDef 7.2 methodology, echinocandin resistance was examined by FKS sequencing, and genetic relatedness was examined by multilocus sequence typing (MLST). One hundred ninety-three episodes provided 205 blood and 220 oral isolates. MLST analysis demonstrated a genetic relationship for 90% of all paired blood and oral isolates. Patients exposed to azoles for >7 days (n ؍ 93) had a significantly larger proportion of species intrinsically less susceptible to azoles (particularly Candida glabrata) among oral isolates than among initial blood isolates (36.6% versus 12.9%; P < 0.001). A similar shift toward species less susceptible to echinocandins among 85 patients exposed to echinocandins for >7 days was not observed (4.8% of oral isolates versus 3.2% of blood isolates; P > 0.5). Acquired resistance in Candida albicans was rare (<5%). However, acquired resistance to fluconazole (29.4%; P < 0.05) and anidulafungin (21.6%; P < 0.05) was common in C. glabrata isolates from patients exposed to either azoles or echinocandins. Our findings suggest that the colonizing mucosal microbiota may be an unrecognized reservoir of resistant Candida species, especially C. glabrata, following treatment for candidemia. The resistance rates were high, raising concern in general for patients exposed to antifungal drugs.
“…One approximation for this study was to interpret the blood isolates as surrogate markers for baseline colonization and to compare this to subsequent oral colonization. Genotyping revealed a 90% genetic correlation for species acquired from both sites, supporting the general concept that the invasive species was also a colonizing agent, as previously shown (15,(37)(38)(39)(40). In addition, the MIC data for paired blood and oral isolates mirrored those for the overall isolate collection for both C. albicans and C. glabrata.…”
The prevalence of intrinsic and acquired resistance among colonizing Candida isolates from patients after candidemia was investigated systematically in a 1-year nationwide study. Patients were treated at the discretion of the treating physician. Oral swabs were obtained after treatment. Species distributions and MIC data were investigated for blood and posttreatment oral isolates from patients exposed to either azoles or echinocandins for <7 or >7 days. Species identification was confirmed using matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) and internal transcribed spacer (ITS) sequencing, susceptibility was examined by EUCAST EDef 7.2 methodology, echinocandin resistance was examined by FKS sequencing, and genetic relatedness was examined by multilocus sequence typing (MLST). One hundred ninety-three episodes provided 205 blood and 220 oral isolates. MLST analysis demonstrated a genetic relationship for 90% of all paired blood and oral isolates. Patients exposed to azoles for >7 days (n ؍ 93) had a significantly larger proportion of species intrinsically less susceptible to azoles (particularly Candida glabrata) among oral isolates than among initial blood isolates (36.6% versus 12.9%; P < 0.001). A similar shift toward species less susceptible to echinocandins among 85 patients exposed to echinocandins for >7 days was not observed (4.8% of oral isolates versus 3.2% of blood isolates; P > 0.5). Acquired resistance in Candida albicans was rare (<5%). However, acquired resistance to fluconazole (29.4%; P < 0.05) and anidulafungin (21.6%; P < 0.05) was common in C. glabrata isolates from patients exposed to either azoles or echinocandins. Our findings suggest that the colonizing mucosal microbiota may be an unrecognized reservoir of resistant Candida species, especially C. glabrata, following treatment for candidemia. The resistance rates were high, raising concern in general for patients exposed to antifungal drugs.
“…Knowing the source of infection and detection of possible routes of transmission can
help with the prevention of clonal spread of pathogenic fungi. RAPD is one of the most
frequently used genotyping methods for epidemiological investigations of
Candida infections worldwide (Lian
et al 2004, Marol & Yücesoy 2008,
Muthig et al 2010, Karaman et al 2013). This technique is easy to perform as well as
rapid, cost-effective and suitable for the typing of a large number of strains (Noumi et al 2009).…”
Section: Discussionmentioning
confidence: 99%
“…For this purpose, it is
important to perform genotyping analysis that would allow evaluation of the spread of these
pathogens. The most commonly used molecular typing methods are restriction endonuclease
analysis, microsatellite analysis, multilocus enzyme electrophoresis, pulsed-field gel
electrophoresis, multilocus sequence typing and random amplified polymorphic DNA polymerase
chain reaction (RAPD PCR) (Krawczyk et al 2009,
Abbes et al 2010, Karaman et al 2013). The latter method was used in this study to evaluate the
level of genetic diversity of C. albicans and C. glabrata
strains isolated from ICU patients from the tertiary hospital in Krakow, Poland over a
two-year period.…”
Over the last decades, Candida spp have been responsible for an
increasing number of infections, especially in patients requiring intensive care.
Knowledge of local epidemiology and analysis of the spread of these pathogens is
important in understanding and controlling their transmission. The aim of this study
was to evaluate the genetic diversity of 31 Candida albicans and
17 Candida glabrata isolates recovered from intensive care unit
patients from the tertiary hospital in Krakow between 2011-2012. The strains were
typed by random amplified polymorphic DNA (RAPD) polymerase chain reaction using five
primers (CD16AS, HP1247, ERIC-2, OPE-3 and OPE-18). The results of the present
investigation revealed a high degree of genetic diversity among the isolates. No
clonal relationship was found among the C. albicans strains, whereas
two C. glabrata isolates were identical. The source of
Candida infection appeared to be mostly endogenous; however, the presence
of two clonal C. glabrata strains suggested the possibility of
cross-transmission of these pathogens. Our study confirmed the high discriminatory
power of the RAPD technique in the molecular typing of Candida
clinical isolates. This method may be applied to the evaluation of transmission
routes of pathogenic fungi on a local level.
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