2005
DOI: 10.1021/jm040224i
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Ligand Binding Analysis for Human α5β1 Integrin:  Strategies for Designing New α5β1 Integrin Antagonists

Abstract: We report a three-dimensional model of the alpha5beta1 integrin headgroup bound to the most potent and selective ligand (SJ749) known to date. The model was built using the comparative protein modeling method, and it is consistent with experimental data. From this study, we identified two potentially important regions in the alpha5beta1 receptor that are peculiar to this integrin and might be worth considering for drug targeting.

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Cited by 75 publications
(79 citation statements)
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“…It is overexpressed in angiogenic endothelial cells but also in astrocytomas and glioblastomas (5) and may represent a new anticancer target. To date, few molecules acting as a 5 h 1 antagonists have been developed, with SJ749 being the most selective nonpeptidic a 5 h 1 antagonist described thus far (6)(7)(8)(9). SJ749 was designed as a fibronectin adhesion antagonist that specifically inhibits a 5 h 1 -mediated cell adhesion to fibronectin.…”
Section: Introductionmentioning
confidence: 99%
“…It is overexpressed in angiogenic endothelial cells but also in astrocytomas and glioblastomas (5) and may represent a new anticancer target. To date, few molecules acting as a 5 h 1 antagonists have been developed, with SJ749 being the most selective nonpeptidic a 5 h 1 antagonist described thus far (6)(7)(8)(9). SJ749 was designed as a fibronectin adhesion antagonist that specifically inhibits a 5 h 1 -mediated cell adhesion to fibronectin.…”
Section: Introductionmentioning
confidence: 99%
“…Erste Anhaltspunkte für die Struktur neuer möglicher a5b1-Liganden lieferte das Homologiemodell des a5b1-Integrins im Komplex mit dem kürzlich publizierten Liganden SJ749. [2,16] Die große ¾hnlichkeit zwischen den Integrinen avb3 und a5b1 (53 % Übereinstimmung von av mit a5, 55 % Über-einstimmung in der Kopfgruppe von b3 mit b1) sollte es ermöglichen, die Qualität unseres Modells durch die Synthese einer Bibliothek maßgeschneiderter Liganden zu prüfen. Analog zu anderen RGD-ähnlichen Liganden enthalten unsere Verbindungen ein Carboxylat und eine basische funktionelle Gruppe im Abstand von ca.…”
unclassified
“…Ein so erstelltes Homologiemodell ist für rationales Wirkstoffdesign geeignet. [1] Hier beschreiben wir die Anwendung unseres kürzlich veröffent-lichten Homologiemodells des a5b1-Integrins [2] auf die Entwicklung hoch aktiver (bis in den subnanomolaren Bereich) Liganden mit Selektivität gegen das eng verwandte avb3-Integrin. Basierend auf Strukturüberlegungen wurde die Selektivität in beide Richtungen hin verändert.…”
unclassified
“…Although these techniques are able to visualize ligand-receptor binding events with high spatial resolution, and bring insights into binding properties like binding affinity and kinetics, none of them provide molecular structural information at ligand-receptor binding sites, which is a key factor in mediating binding properties. Chemical elucidation of ligand-receptor binding sites is typically obtained by characterizing crystal structures of purified receptors using x-ray diffraction (XRD) and nuclear magnetic resonance (NMR), and building computational models for analysis [20,21] . New technologies are needed to provide molecular insight into ligand-receptor binding chemistry in cell membranes, where the cellular environment can impact receptor-ligand interactions.…”
Section: Hhs Public Accessmentioning
confidence: 99%