This case report provides a detailed description of a middle-aged male patient who presented with fatigue and decreased appetite whose medical history revealed type 2 diabetes mellitus, Whipple surgery and pulmonary tuberculosis. Upon admission, the patient presented with recurrent fever,septic shock and splenomegaly. Extensive diagnostic workup, including blood tests, imaging studies and culture, was performed to investigate the underlying cause. Inferior vena cava septic thrombophlebitis was finally diagnosed. The patient showed improvement and was discharged after receiving a full course of high-dose antibiotics and heparin treatment.