Phenological events of alpine plants are strongly influenced by the seasonal thermal conditions at the local scale that are caused by heterogeneity in snowmelt time.Populations in late-snowmelt locations suffer from a short period for seed maturation, in which rapid flowering that occurs soon after snowmelt (i.e., a low thermal requirement for flowering) is advantageous. To test the possibility of local adaptation of flowering phenology, we compared reproductive phenology, the preflowering period, and the thermal requirement for flowering of the alpine-snowbed species Gentiana nipponica Maxim. between populations inhabiting early-and late-snowmelt sites within a local area. Plants in the late-snowmelt population showed a shorter preflowering period than in the early-snowmelt population; nevertheless, they often failed to set fruit owing to the short growth period. To test the plasticity and genetic regulation of flowering phenology, we performed a reciprocal transplant experiment between early-and late-snowmelt populations. Although the preflowering period showed clear plastic responses depending on the transplanted habitats, the lower thermal requirement for flowering was retained in plants originating from the latesnowmelt populations, even after transplantation. Therefore, habitat-specific differentiation of flowering phenology was genetically determined between these local populations.