Summary. The cytogenetically unidentifiable t(12;21) (p12;q22), resulting in ETV6/CBFA2 fusion, is the most frequent chromosomal aberration in childhood acute lymphoblastic leukaemia (ALL). We report a variant, ider(21) (q10)t(12;21)(p12;q22), which was shown to contain double ETV6/CBFA2 fusions by fluorescence in situ hybridization. This is the second case of such an ider(21) in childhood ALL, suggesting that it is a new recurrent abnormality. Since the ider(21) is cytogenetically indistinguishable from i(21)(q10) and idic(21)(p11), changes associated with similar clinical features as the t(12;21), i.e. pre-B-cell ALL and age 1-10 years, we suggest that all ALL displaying these changes should be tested for ETV6/CBFA2 fusion transcript.
Keywords: childhood ALL, cytogenetics, FISH, ETV6/CBFA2.The t(12;21)(p12;q22) is present in 20-30% of childhood acute lymphoblastic leukaemia (ALL), making it the single most frequent chromosomal abnormality in this setting (Romana et al, 1995b;Liang et al, 1996). The patients are usually between 1 and 10 years old, display a pre-B-cell ALL, and seem to have a favourable, or even excellent, prognosis (Shurtleff et al, 1995;Liang et al, 1996). Since the breakpoints at chromosomes 12 and 21 are located in similarly lightstaining telomeric bands, this translocation is unidentifiable with standard banding techniques. However, using fluorescence in situ hybridization (FISH) the aberration is readily seen. At the molecular level, the translocation has been shown to result in fusion between the ETV6 and CBFA2 genes (previously TEL and AML1, respectively) (Golub et al, 1995;Romana et al, 1995a).A 6-year-old boy was admitted to hospital due to pain in the legs and fever. Peripheral blood showed a white cell count of 3 : 2 × 10 9 /l, haemoglobin of 6 . 9 g/dl and thrombocytes of 52 × 10 9 /l. Hepatosplenomegaly was noted on clinical examination. Morphological and immunophenotypical bone marrow investigations revealed a pre-B-cell ALL of FAB L1/ L2 subtype. Cytogenetic studies showed a pseudodiploid karyotype: 46,XY,del(12)(p12),i(21)(q10).FISH was performed, as previously described (Andreasson et al, 1997), with whole chromosome painting (wcp) probes for chromosomes 12 and 21. This analysis not only verified the i(21q) but also disclosed a der(12) with chromosome 21 material at the end of the p-arm, suggesting a cryptic t(12;21). Further FISH experiments were performed with YAC probes 964c10 and 958b8, covering the ETV6 gene (Kobayashi et al, 1994) and cosmids 179a6, 163e7 and 244e8, specific for the same gene . CBFA2 rearrangement was detected with five overlapping YAC probes: 812f11, covering the CBFA2 breakpoint, 464h8 and 613e10 located telomeric, and 72h9 and 831b9 located centromeric to the breakpoint (Romana et al, 1995a). These analyses showed: (1) an ETV6/CBFA2 fusion at both arms of the isochromosome, consequently re-interpreted as ider(21)(q10)t(12;21)(p12;q22); (2) a reciprocal fusion at the der(12)t(12;21); and (3) no signal at the del(12)(p12), neither by YAC nor cosmid probe...