2013
DOI: 10.1016/j.bpj.2012.11.634
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Is ASP-454 Necessary for Na+ and K+ Binding in the Glutamate Transporter EAAC1?

Abstract: NCLX/NCKX6 is a recently identified gene responsible for a mitochondrial Na þ-Ca 2þ exchanger (NCX mit), a Ca 2þ extrusion system from mitochondria. Although there have been accumulated data regarding roles of NCLX in various kinds of cells, little is known about the roles in cardiomyocytes, where repetitive Ca 2þ transients occur and where a huge amount of ATP is generated and utilized. In the present study, we carried out a combination study of NCLX knockdown in spontaneously beating atrial cell line HL-1 an… Show more

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“…To further test our MD simulation results with a system containing aspartate as the ligand, for which force field parameters are well-established, we performed simulations using a EAAT3 homology model. 41 Simulations were performed without Na + occupying the Na2 site, which promotes opening of hairpin loop 2 and destabilizes the bound amino acid. 42,43 As shown in Figures 4A and B, aspartate was stable for up to 760 ns in the binding site at 0 mV.…”
Section: ■ Results and Discussionmentioning
confidence: 76%
“…To further test our MD simulation results with a system containing aspartate as the ligand, for which force field parameters are well-established, we performed simulations using a EAAT3 homology model. 41 Simulations were performed without Na + occupying the Na2 site, which promotes opening of hairpin loop 2 and destabilizes the bound amino acid. 42,43 As shown in Figures 4A and B, aspartate was stable for up to 760 ns in the binding site at 0 mV.…”
Section: ■ Results and Discussionmentioning
confidence: 76%