2016
DOI: 10.1016/j.jprot.2016.03.032
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Ion mobility-enhanced MSE-based label-free analysis reveals effects of low-dose radiation post contextual fear conditioning training on the mouse hippocampal proteome

Abstract: Recent advances in the field of biodosimetry have shown that the response of biological systems to ionizing radiation is complex and depends on the type and dose of radiation, the tissue(s) exposed, and the time lapsed after exposure. The biological effects of low dose radiation on learning and memory are not well understood. An ion mobility-enhanced data-independent acquisition (MSE) approach in conjunction with the IsoQuant software tool was utilized for label-free quantification of hippocampal proteins with… Show more

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Cited by 5 publications
(3 citation statements)
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“…DIA technologies are mass spectrometer platform-dependent. For example, the representative DIA technologies are BoxCar [ 112 ], SWATH [ 113 , 114 ], diaPASEF [ 115 ] and MS E and SONAR [ 116 , 117 , 118 ], which are scan modes for Orbitrap (Thermo, Waltham, MA, USA), TripleToF (Sciex, Framingham, MA, USA), Q-Tof (Bruker, Billerica, MA, USA) and Q-ToF (Waters, Milford, MA, USA) mass spectrometers, respectively.…”
Section: Mass Spectrometry For Biomarker Developmentmentioning
confidence: 99%
“…DIA technologies are mass spectrometer platform-dependent. For example, the representative DIA technologies are BoxCar [ 112 ], SWATH [ 113 , 114 ], diaPASEF [ 115 ] and MS E and SONAR [ 116 , 117 , 118 ], which are scan modes for Orbitrap (Thermo, Waltham, MA, USA), TripleToF (Sciex, Framingham, MA, USA), Q-Tof (Bruker, Billerica, MA, USA) and Q-ToF (Waters, Milford, MA, USA) mass spectrometers, respectively.…”
Section: Mass Spectrometry For Biomarker Developmentmentioning
confidence: 99%
“…MS E has been applied to study the effect of hippocampal proteins with the goal of determining protein alteration associated with low-dose whole body ionizing radiation on the changes of the hippocampal proteome. Out of about 400 identified proteins, about 70 have shown significant alteration (Huang et al, 2016). Using a similar approach, more than 2,000 proteins have been identified from post-synaptic density (Distler et al, 2014).…”
Section: Recent Advancement Of Diamentioning
confidence: 99%
“…Then samples were held at 4°C overnight for protein release and centrifuged at 100,000 × g for 15 minutes to remove the cell debris. The remaining supernatants were collected to obtain the proteome (Huang et al, 2016). Total protein content was measured using the Bradford assay (Bradford 1976).…”
Section: 4 Protein Sample Preparationmentioning
confidence: 99%