Upon apoptosis induction, translocation of mammalian mitochondrial endonuclease G (EndoG) to the nucleus coincides with large-scale DNA fragmentation. Here, we describe for the first time a homologue of EndoG in filamentous fungi by investigating if the Aspergillus nidulans homologue of the EndoG gene, named nucA EndoG , is being activated during farnesol-induced cell death. Our results suggest that NucA is not involved in cell death, but it plays a role in the DNA-damaging response in A. nidulans.The mechanisms involved in cell death in filamentous fungi are not well known (for reviews, see references 9, 17, and 24). We have been using Aspergillus nidulans and the isoprenoid farnesol (FOH), which inhibits proliferation and induces apoptosis, as a model system and cell death stimulus, respectively, aiming to understand by which means filamentous fungi are driven toward cell death (3,5,20,23). In mammalian cells, at least two major apoptotic pathways have been depicted: (i) the intrinsic pathway, which needs the involvement of the mitochondria, and (ii) the extrinsic pathway, where mitochondria are bypassed and caspases are activated (for a review, see reference 6). One of the hallmarks of the intrinsic pathway is the release of apoptogenic factors, such as cytochrome c, to the cytosol and the consequent assembly, organized by this protein, of the high-molecular-weight complex, the mitochondrial apoptosome, which activates caspases (for a review, see reference 6). In Saccharomyces cerevisiae cells undergoing an apoptotic process induced by acetic acid, translocation of Cyc1p to the cytosol was observed (13). Another factor of the intrinsic pathway is endonuclease G (EndoG), which has been described as a mitochondrial endonuclease that digests both DNA and RNA (1, 2). Upon apoptosis induction, translocation of mammalian EndoG and its S. cerevisiae homologue NUC1 to the nucleus coincides with large-scale DNA fragmentation (2,12,16). Here, we describe for the first time a homologue of EndoG in filamentous fungi by investigating if the A. nidulans EndoG homologue, named nucA EndoG , is being activated during FOH-induced cell death.We identified AN2185.2 as the putative homologue of S. cerevisiae NUC1 (53% identity, 68% similarity, E value of 2eϪ97). In silico analysis of NucA (Fig. 1A) shows a putative mitochondrial target sequence (MTS) located at amino acids 1 to 28 (as predicted by MITOPROT