Investigations of theoretical principles for MALDI-MS derived from solvent-free sample preparation

213

Matrix assisted inlet ionization (MAII) is a method in which a matrix:analyte mixture produces mass spectra nearly identical to electrospray ionization without the application of a voltage or the use of a laser as is required in laserspray ionization (LSI), a subset of MAII. In MAII, the sample is introduced by, for example, tapping particles of dried matrix:analyte into the inlet of the mass spectrometer and, therefore, permits the study of conditions pertinent to the formation of multiply charged ions without the need of absorption at a laser wavelength. Crucial for the production of highly charged ions are desolvation conditions to remove matrix molecules from charged matrix: analyte clusters. Important factors affecting desolvation include heat, vacuum, collisions with gases and surfaces, and even radio frequency fields. Other parameters affecting multiply charged ion production is sample preparation, including pH and solvent composition. Here, findings from over 100 compounds found to produce multiply charged analyte ions using MAII with the inlet tube set at 450°C are presented. Of the compounds tested, many have -OH or -NH 2 functionality, but several have neither (e.g., anthracene), nor aromaticity or conjugation. Binary matrices are shown to be applicable for LSI and solvent-free sample preparation can be applied to solubility restricted compounds, and matrix compounds too volatile to allow drying from common solvents. Our findings suggest that the physical properties of the matrix such as its morphology after evaporation of the solvent, its propensity to evaporate/sublime, and its acidity are more important than its structure and functional groups.

Section: Introductionmentioning

confidence: 99%

Matrix Assisted Ionization: New Aromatic and Nonaromatic Matrix Compounds Producing Multiply Charged Lipid, Peptide, and Protein Ions in the Positive and Negative Mode Observed Directly from Surfaces

Inutan

Wang

et al. 2012

213

“…To make the sample preparation step easier, less time consuming, and reduce the risk of cross-contamination, we developed a simple version of the solvent-free sample preparation method, now called the vortex method [16]. Although the utility of solvent-free sample preparation for MALDI has been clearly demonstrated, the investigations into why it works and what impact these data have on our overall understanding of the MALDI process have only recently begun [17,18].To develop increased understanding of the utility of the solvent-free MALDI sample preparation method, we have investigated the morphology of these samples using different imaging experiments-optical imaging [19], scanning electron microscopy (SEM) [20], atomic force microscopy (AFM) [21], and time-of-flight secondary ion mass spectrometry (ToF-SIMS) [22]. Previous work has shown the utility of investigating MALDI sample morphology using imaging methods.…”

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confidence: 99%

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confidence: 99%

Imaging the morphology of solvent-free prepared MALDI samples

Hanton

McEvoy

Stets

2008

Matrix-assisted laser desorption/ionization (MALDI) mass spectrometry is an important technique to characterize many different materials, including synthetic polymers. MALDI mass spectral data can be used to determine the polymer average molecular weights, repeat units, and end groups. The development of solvent-free sample preparation methods has enabled MALDI to analyze insoluble materials and, interestingly, can provide higher-quality mass spectral data. Although the utility of solvent-free sample preparation for MALDI has been demonstrated, the reasons for its success are only now being discovered. In this study, we use microscopy tools to image samples prepared using solvent-free methods to examine the morphology of these samples. The samples are prepared using a simple vortex method. Our results show that the average particle size of typical MALDI matrices is reduced from their original tens to hundreds of micrometers to hundreds of nanometers. This size reduction of the matrix occurs in one minute using the vortex method. We also observe remarkably smooth and homogeneous sample morphologies for the laser to interrogate, especially considering the relatively crude methods used to prepare our samples. [5][6][7][8][9][10]. MALDI can generate important data on the telomer repeat units, end groups, and average molecular weights of these materials. MALDI methods have been developed to address a broad variety of different polymer materials containing different chemistries. One of the key issues in traditional MALDI sample preparation is making true solutions of the analyte and the matrix [9]. Many interesting polymeric analytes are either completely insoluble or present significant challenges in making analytically useful solutions. To address these issues, solvent-free sample preparation methods have been developed. While several groups investigated solventfree sample preparation methods at nearly the same time, the methods developed by Trimpin, Räder, and coworkers have gained widespread use [11][12][13][14][15]. To make the sample preparation step easier, less time consuming, and reduce the risk of cross-contamination, we developed a simple version of the solvent-free sample preparation method, now called the vortex method [16]. Although the utility of solvent-free sample preparation for MALDI has been clearly demonstrated, the investigations into why it works and what impact these data have on our overall understanding of the MALDI process have only recently begun [17,18].To develop increased understanding of the utility of the solvent-free MALDI sample preparation method, we have investigated the morphology of these samples using different imaging experiments-optical imaging [19], scanning electron microscopy (SEM) [20], atomic force microscopy (AFM) [21], and time-of-flight secondary ion mass spectrometry (ToF-SIMS) [22]. Previous work has shown the utility of investigating MALDI sample morphology using imaging methods. We have used SEM to investigate the morphology of electrospray deposited samples [23] ...

“…Analyte is often supposed to be co-crystallized with a large excess of matrix. This incorporation of analyte into the small matrix crystals (co-crystallization) remains an open question [3,4]. However, a protein in the target is likely surrounded by matrix molecules.…”

mentioning

confidence: 99%

Protein desolvation in UV matrix-assisted laser desorption/ionization (MALDI)

Sachon

Clodic

Blasco

et al. 2007

We describe experiments in MALDI-TOF and MALDI-TOF-TOF showing that the ejection of protein-matrix cluster ions and their partial decay in the source occur in MALDI. The use of radial beam deflection and small size detector in linear mode allows detection of ions with higher time-of-flight and kinetic energy deficit. MALDI-TOF-TOF experiments were carried out by selecting chemical noise ions at m/z higher than that of a free peptide ion. Whatever the selected m/z (up to m/z 300) the molecular peptide ion appeared as the main fragment. The production of protein-matrix clusters and their partial decay in the source was found to increase with the size of the protein (MW from 1000 to 150,000 u), although it decreases with increasing charge state. These effects were observed for different matrices (HCCA and SA) and in a large laser fluence range. Experimental results and calculation highlight that a continuous decay of protein-matrix cluster ions occurs in the source. This decay-desolvation process can account for the high-mass tailing and peak shifting as well as the strong noise/background in the mass spectra of proteins. . This new ionization method allows the production of large intact molecular ions (protein, peptide, DNA, synthetic polymer, etc.) in the gas phase. Intact ions are then analyzed by a mass analyzer, essentially time-of-flights (TOFs).Although MALDI-TOF is now a well-established and powerful method, many questions are still open concerning (1) the conditions of a successful experiment and (2) the main mechanisms involved in the formation of free intact ions [2].Target preparation is a critical step in MALDI. Analyte is often supposed to be co-crystallized with a large excess of matrix. This incorporation of analyte into the small matrix crystals (co-crystallization) remains an open question [3,4]. However, a protein in the target is likely surrounded by matrix molecules.The ejection of material in the very first stage leads to a very dense plume (with a density similar to that of the target) becoming increasingly more diluted (gas) during the plume expansion.The main question is how a free ion is formed from such a dense plume and why analyte-matrix clusters are not the main products. Ejection of matrix-analyte clusters was already found as essential for the analyte ionization in MALDI [5][6][7][8]. Desorption of large clusters was also predicted from molecular dynamics simulations [9,10]. Other authors believe that ionization can be explained by an ion-molecule reaction in the plume [11]. Recent very interesting simulations, including desorption/ablation molecular dynamics and ionization processes modeling, showed that free ions and those in clusters are produced with t t close abundance in the plume [12].The ion analysis through axial-TOF instruments is probably the key point of the main observation of free ions in MALDI. A free ion formed in the source before the delay time is fully accelerated and is detected at a given time forming a resolved peak. The peak width is a function of the initial a...