Investigation of the relationship between miR-33a, miR-122, erythrocyte membrane fatty acids profile, and serum lipids with components of metabolic syndrome in type 2 diabetic patients

Masoudi, Fatemeh; Sharifi, Mohammadreza; Pourfarzam, Morteza

doi:10.4103/1735-5362.343078

Cited by 7 publications

(2 citation statements)

References 39 publications

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“…For B. mori miRNAs, we found that there was significantly decreased in the number of miRNAs in the silkworm embryos and larvae exposed to the congenital N. bombycis challenge, compared with uninfected embryos and larvae. Both miRNA-33 and miRNA-122, which can target lipid metabolism genes to reprogram host lipid metabolism [68][69][70], are down-regulated during the congenital N. bombycis infection. miR-276 is associated with amino acid metabolism [71], which is down-regulated during the congenital N. bombycis infection.…”

Section: Discussionmentioning

confidence: 99%

Non-coding RNAs identification and regulatory networks in pathogen-host interaction in the microsporidia congenital infection

et al. 2023

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Background The interaction networks between coding and non-coding RNAs (ncRNAs) including long non-coding RNA (lncRNA), covalently closed circular RNA (circRNA) and miRNA are significant to elucidate molecular processes of biological activities and interactions between host and pathogen. Congenital infection caused by vertical transmission of microsporidia N. bombycis can result in severe economic losses in the silkworm-feeding industry. However, little is known about ncRNAs that take place in the microsporidia congenital infection. Here we conducted whole-transcriptome RNA-Seq analyses to identify ncRNAs and regulatory networks for both N. bombycis and host including silkworm embryos and larvae during the microsporidia congenital infection. Results A total of 4,171 mRNAs, 403 lncRNA, 62 circRNAs, and 284 miRNAs encoded by N. bombycis were identified, among which some differentially expressed genes formed cross-talk and are involved in N. bombycis proliferation and infection. For instance, a lncRNA/circRNA competing endogenous RNA (ceRNA) network including 18 lncRNAs, one circRNA, and 20 miRNAs was constructed to describe 14 key parasites genes regulation, such as polar tube protein 3 (PTP3), ricin-B-lectin, spore wall protein 4 (SWP4), and heat shock protein 90 (HSP90). Regarding host silkworm upon N. bombycis congenital infection, a total of 14,889 mRNAs, 3,038 lncRNAs, 19,039 circRNAs, and 3,413 miRNAs were predicted based on silkworm genome with many differentially expressed coding and non-coding genes during distinct developmental stages. Different species of RNAs form interacting network to modulate silkworm biological processes, such as growth, metamorphosis and immune responses. Furthermore, a lncRNA/circRNA ceRNA network consisting of 140 lncRNAs, five circRNA, and seven miRNAs are constructed hypothetically to describe eight key host genes regulation, such as Toll-6, Serpin-6, inducible nitric oxide synthase (iNOS) and Caspase-8. Notably, cross-species analyses indicate that parasite and host miRNAs play a vital role in pathogen-host interaction in the microsporidia congenital infection. Conclusion This is the first comprehensive pan-transcriptome study inclusive of both N. bombycis and its host silkworm with a specific focus on the microsporidia congenital infection, and show that ncRNA-mediated regulation plays a vital role in the microsporidia congenital infection, which provides a new insight into understanding the basic biology of microsporidia and pathogen-host interaction.

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Section: Discussionmentioning

confidence: 99%

Non-coding RNAs identification and regulatory networks in pathogen-host interaction in the microsporidia congenital infection

et al. 2023

View full text Add to dashboard Cite

show abstract

“…For B. mori miRNAs, we found that there was signi cantly decreased in the number of miRNAs in the silkworm embryos and larvae exposed to the congenital N. bombycis challenge, compared with uninfected embryos and larvae. Both miRNA-33 and miRNA-122, which can target lipid metabolism genes to reprogram host lipid metabolism [53][54][55], are down-regulated during the congenital N. bombycis infection. miR-276 is associated with amino acid metabolism [56], which is downregulated during the congenital N. bombycis infection.…”

Section: Discussionmentioning

confidence: 99%

Non-coding RNAs identification and regulatory networks in pathogen-host interaction in the microsporidia congenital infection

Shen

Yang

Luo

et al. 2023

Preprint

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Background： The interaction networks between coding and non-coding RNAs (ncRNAs) including long non-coding RNA (lncRNA), covalently closed circular RNA (circRNA) and miRNA are significant to elucidate molecular processes of biological activities and interactions between host and pathogen. Congenital infection caused by vertical transmission of microsporidia N. bombyciscan result in severe economic losses in the silkworm-feeding industry. However, little is known that about ncRNAs that take place in the microsporidia congenital infection. Here we conducted whole-transcriptome RNA-Seq analyses to identify ncRNAs and regulatory networks for both N. bombycis and host including silkworm embryos and larvae during the microsporidia congenital infection. Results: A total of 4,171 mRNAs, 403 lncRNA, 62 circRNAs, and 284 miRNAs encoded by N. bombycis were identified, among which some differentially expressed genes formed cross-talk and are involved in N. bombycis proliferation and infection. For instance, a lncRNA/circRNA competing endogenous RNA (ceRNA) network including 18 lncRNAs, one circRNA, and 20 miRNAs was constructed to describe 14 key parasites genes regulation, such as polar tube protein 3 (PTP3), ricin-B-lectin, spore wall protein 4 (SWP4), and heat shock protein 90 (HSP90). Regarding silkworm host upon N. bombyciscongenital infection, a total of 14,889 mRNAs, 3,038 lncRNAs, 19,039 circRNAs, and 3,413 miRNAs were predicted based on silkworm genome with many differentially expressed coding and non-coding genes during distinct developmental stages. Different species of RNAs form interacting network to modulate silkworm biological processes, such as growth, metamorphosis and immune responses.Furthermore, a lncRNA/circRNA ceRNA network consisting of 140 lncRNAs, five circRNA, and seven miRNAs are constructed hypothetically to describe eight key host genes regulation, such as Toll-6, Serpin-6, inducible nitric oxide synthase (iNOS) and Caspase-8. Notably, cross-species analyses indicate that parasite and host miRNAs play a vital role in pathogen-host interaction in the microsporidia congenital infection. Conclusion: This is the first comprehensive pan-transcriptome study inclusive of both N. bombycis and its host silkworm with a specific focus on microsporidia congenital infection, and show that ncRNA-mediated regulation plays a vital role in the microsporidia congenital infection, which provides a new insight into understanding the basic biology of microsporidia and pathogen-host interaction.

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Regulatory Roles of MicroRNAs in the Pathogenesis of Metabolic Syndrome

et al. 2023

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Investigation of the relationship between miR-33a, miR-122, erythrocyte membrane fatty acids profile, and serum lipids with components of metabolic syndrome in type 2 diabetic patients

Cited by 7 publications

References 39 publications

Non-coding RNAs identification and regulatory networks in pathogen-host interaction in the microsporidia congenital infection

Non-coding RNAs identification and regulatory networks in pathogen-host interaction in the microsporidia congenital infection

Non-coding RNAs identification and regulatory networks in pathogen-host interaction in the microsporidia congenital infection

Regulatory Roles of MicroRNAs in the Pathogenesis of Metabolic Syndrome

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