Calcium flux through store-operated calcium entry is a central regulator of intracellular calcium signaling. The two key components of the store-operated calcium release-activated calcium channel are the Ca 2؉ -sensing protein stromal interaction molecule 1 (STIM1) and the channel pore-forming protein Orai1. During store-operated calcium entry activation, calcium depletion from the endoplasmic reticulum triggers a series of conformational changes in STIM1 that unmask a minimal Orai1-activating domain (CRAC activation region (CAD)). To gate Orai1 channels, the exposed STIM1-activating domain binds to two sites in Orai1, one in the N terminus and one in the C terminus. Whether the two sites operate as distinct binding domains or cooperate in CAD binding is unknown. In this study, we show that the N and C-terminal domains of Orai1 synergistically contribute to the interaction with STIM1 and couple STIM1 binding with channel gating and modulation of ion selectivity.Store-operated calcium entry represents a key mechanism by which cells generate Ca 2ϩ signals and maintain Ca 2ϩ homeostasis by replacing Ca 2ϩ lost from the endoplasmic reticulum (ER) 2 with Ca 2ϩ that enters the cytoplasm through plasma membrane channels. The Ca 2ϩ release-activated Ca 2ϩ (CRAC) channel is a prototypical store-operated calcium entry channel whose essential components are STIM1, the Ca 2ϩ sensor of the ER, and Orai1, the CRAC channel pore-forming subunit. STIM1 is a single-pass ER membrane protein with several functional domains, including three coiled-coil domains (CC1, CC2, and CC3) facing the cytosol, with CC2 and CC3 forming part of a minimal CRAC channel activation domain called CAD (1) or STIM-Orai activating region (SOAR) (2) (spanning residues 339 -448 in hSTIM1, referred to hereafter only as CAD). Each Orai1 subunit has four transmembrane segments, with the N and C termini of the protein facing the cytosol, and Orai1 channels are assembled from hexamers of Orai1 subunits. The activation of CRAC channels starts when depletion of calcium from the ER causes rearrangement of STIM1 and unmasking of CAD (3-8). When exposed, CAD binds to a site in the Orai1 N terminus (N-terminal binding domain (NBD), residues 74 -87) and to a second site in the Orai1 C terminus (C-terminal binding domain (CBD), residues 267-292) (1, 9). This interaction results in clustering of STIM-Orai1 at ER-PM (plasma membrane) junctions and in pore opening of Orai1 channels, which mediate calcium influx into cells (10 -17). We and others have shown recently that STIM1 binding to both the Orai1 NBD and CBD is critical for channel activation and that binding of STIM1 at these N-and C-terminal domains of Orai1 likely induces rearrangements in proximal membrane segments to open the channel (18 -20). Whether the Orai1 NBD and CBD contribute to STIM1 binding independently or through a more complex manner is unknown.In this study, we determine the relative contribution of the Orai1 NBD and CBD to interaction with STIM1 by studying the effect of cycling mutations between...