A number of methods have been developed recently that stimulate the human brain non-invasively through the intact scalp. The most common are transcranial magnetic stimulation (TMS), transcranial electric stimulation (TES) and transcranial direct current stimulation (TDCS). They are widely used to probe function and connectivity of brain areas as well as therapeutically in a variety of conditions such as depression or stroke. They are much less focal than conventional invasive methods which use small electrodes placed on or in the brain and are often thought to activate all classes of neurones in the stimulated area. However, this is not true. A large body of evidence from experiments on the motor cortex shows that non-invasive methods of brain stimulation can be surprisingly selective and that adjusting the intensity and direction of stimulation can activate different classes of inhibitory and excitatory inputs to the corticospinal output cells. Here we review data that have elucidated the action of TMS and TES, concentrating mainly on the most direct evidence available from spinal epidural recordings of the descending corticospinal volleys. The results show that it is potentially possible to test and condition specific neural circuits in motor cortex that could be affected differentially by disease, or be used in different forms of natural behaviour. However, there is substantial interindividual variability in the specificity of these protocols. Perhaps in the future it will be possible, with the advances currently being made to model the electrical fields induced in individual brains, to develop forms of stimulation that can reliably target more specific populations of neurones, and open up the internal circuitry of the motor cortex for study in behaving humans. Abbreviations AP, anterior to posterior; ICF, intracortical facilitation; ISI, interstimulus interval; LM, lateral to medial; LTP/LTD, long term potentiation/depression; MEP, motor evoked potential; PA, posterior to anterior; PAS, paired associative stimulation; PprTMS, paired pulse repetitive TMS; PSTH, peri-stimulus time histogram; PTN, pyramidal tract neurone; rTMS, repetitive transcranial magnetic stimulation; SAI, short latency afferent inhibition; SICI, short interval intracortical inhibition; TBS, theta burst stimulation; TDCS, transcranial direct current stimulation; TES, transcranial electric stimulation; TMS, transcranial magnetic stimulation.Vincenzo Di Lazzaro is Professor of Neurology and Chair of the Department of Neurology, University Campus Bio-Medico, Rome, Italy. His main areas of research are human brain plasticity, the physiological bases of recovery in stroke, the use of neurophysiological techniques for the diagnosis of neurological disorders and the evaluation of the effects of drugs on the intact human brain. John C. Rothwell is Professor of Human Neurophysiology at UCL Institute of Neurology, London. His research concentrates on understanding the physiology and pathophysiology of human movement control in health an in ...