Ligand-induced dimerization of receptor tyrosine kinases (RTKs) modulates a system of linked biochemical reactions, sharply switching the RTK from a quiescent state to an active state that becomes phosphorylated and triggers intracellular signaling pathways. To improve our understanding of this molecular switch, we developed a quantitative model for hepatocyte growth factor receptor (c-MET) activation using parameters derived in large part from c-MET kinetic and thermodynamic experiments. Our model accurately produces the qualitative and quantitative dynamic features of c-MET phosphorylation observed in cells following ligand binding, including a rapid transient buildup of phosphorylated c-MET at high ligand concentrations. In addition, our model predicts a slow buildup of phosphorylated c-MET under conditions of reduced phosphatase activity and no extracellular agonist. Significantly, this predicted response is observed in cells treated with phosphatase inhibitors, further validating our model. Parameter sensitivity studies clearly show that synergistic oligomerization-dependent changes in c-MET kinetic, thermodynamic, and dephosphorylation properties result in the selective activation of the dimeric receptor, confirming that this model can be used to accurately evaluate the relative importance of linked biochemical reactions important for c-MET activation. Our model suggests that the functional differences observed between c-MET monomers and dimers may have incrementally evolved to optimize cell surface signaling responses.The observed nonlinearity of intracellular signaling pathways is believed to enable small changes in reaction kinetics or input signals to be highly amplified, generating large changes in the downstream signaling responses necessary for cell proliferation, differentiation, migration, and motility (1-7). The amplitude, duration, and strength of many intracellular signaling responses are dependent on the activation of receptor tyrosine kinases (RTKs), 1 where activation is defined as receptor phosphorylation and subsequent downstream signaling. 1 Abbreviations: RTK, receptor tyrosine kinase; PTP, protein tyrosine phosphatase; PDGF, platelet-derived growth factor; EGF, epidermal growth factor; HGF, hepatocyte growth factor; IR, insulin receptor; Tyr, tyrosine-containing effector; pTyr, phosphorylated tyrosinecontaining effector; InlB, Internalin B; PY, phosphotyrosine; Y, tyrosine. These observations suggest RTK activation is a critical and tightly regulated process under normal physiological conditions (3,8,9). Although several essential aspects of RTK activation have been defined, the detailed biochemical, structural, and dynamic processes that regulate RTKs and enable them to selectively induce intracellular signaling in response to extracellular ligand binding are poorly understood (3,7,9,10).
NIH Public AccessIt is demonstrated that autophosphorylation regulates RTK [e.g., c-MET receptor; epidermal growth factor receptor (EGFR)] catalytic activity and creates binding sites for effe...